====== UMK57 0.6μM R03 exp107 ======
==== Mechanism of Action ====
Potentiates kinesin-13 (MCAK), destabilizes kinetochore-MT attachment, suppresses chromosome mis-segregation
* **Class / Subclass 1:** Cell Cycle / Mitotic Inhibitor
* **Class / Subclass 2:** Organelle Function / Cytoskeletal Inhibitor
==== Technical Notes ====
* **PubChem Name:** %%5-(4-Methylphenyl)-4-pyrrolidinylthiopheno[2,3-d]pyrimidine%%
* **Synonyms:** N/A
* **CAS #:** 342595-74-8
* **PubChem CID:** [[https://pubchem.ncbi.nlm.nih.gov/compound/693939|693939]]
* **IUPAC:** %%5-(4-methylphenyl)-4-pyrrolidin-1-ylthieno[2,3-d]pyrimidine%%
* **INCHI Name:** InChI=1S/C17H17N3S/c1-12-4-6-13(7-5-12)14-10-21-17-15(14)16(18-11-19-17)20-8-2-3-9-20/h4-7,10-11H,2-3,8-9H2,1H3
* **INCHI Key:** VOAWQTDHSSKEKA-UHFFFAOYSA-N
* **Molecular Weight:** 295.4
* **Canonical SMILES:** CC1=CC=C(C=C1)C2=CSC3=NC=NC(=C23)N4CCCC4
* **Isomeric SMILES:** N/A
* **Molecular Formula:** C17H17N3S
{{:chemogenomics:structures:chem-0039.svg?nolink}}
* **Supplier Name:** In house - University of Montreal - Chemistry Platform
* **Catalog #:** N/A
* **Lot #:** N/A
* **HRMS (ESI-TOF) m/z:** [M+H]+ Calcd for C17H18N3S 296.1216; found 296.1142
* **Platform ID:** UMK57
* **Min:** -2.8530; **Max:** 75.4945
{{:chemogenomics:dose_response:dr_159.png?nolink&500 |}}
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^ IC ^ Concentration (µM) ^
| IC10 |N/A |
| IC20 |0.3698 |
| IC30 |0.6436 |
| IC40 |1.0136 |
| IC50 |1.5379 |
| IC60 |N/A |
| IC70 |N/A |
| IC80 |N/A |
| IC90 |N/A |
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==== Screen Summary ====
* **Round**: 03
* **Dose**: 600nM
* **Days of incubation**: 8
* **Doublings**: 7.7
* **Numbers of reads**: 11763207
==== Screen Results ====
^Sensitive/Resistant hits (FDR<0.05)^CRANKS^Score Plot^Top 30 Genes^Screen Similarity^Top 30 Sensitive GO terms^Top 30 Resistant GO terms^
|5/0|[[https://files.tyerslab.com/files/public/chemogenomics/cranks/UMK57_0.6uM_Round-3_exp107.txt|Scores]]||||||
{{:chemogenomics:cranks_plots:exp107.png?nolink}}
^Gene^CRANKS Score^FDR^
|[[:human_genes:T:TACC3|TACC3]]|-4.25|<0.01|
|[[:human_genes:K:KNTC1|KNTC1]]|-3.59|<0.01|
|[[:human_genes:S:SEPHS1|SEPHS1]]|-3.04|<0.01|
|[[:human_genes:G:GTSE1|GTSE1]]|-3.00|<0.01|
|[[:human_genes:G:GAK|GAK]]|-2.79|0.01|
|[[:human_genes:F:FAF2|FAF2]]|-2.74|0.10|
|[[:human_genes:S:SKIV2L|SKIV2L]]|-2.38|0.26|
|[[:human_genes:B:BRD1|BRD1]]|-2.37|0.11|
|[[:human_genes:N:NPRL3|NPRL3]]|-2.36|0.47|
|[[:human_genes:Q:QRICH1|QRICH1]]|-2.35|0.28|
|[[:human_genes:M:MSI2|MSI2]]|-2.35|0.11|
|[[:human_genes:P:PRICKLE1|PRICKLE1]]|-2.33|0.11|
|[[:human_genes:C:CWC27|CWC27]]|-2.32|0.11|
|[[:human_genes:C:CNOT2|CNOT2]]|-2.23|0.16|
|[[:human_genes:R:RNF169|RNF169]]|-2.23|0.16|
|[[:human_genes:H:H2AFJ|H2AFJ]]|-2.20|0.17|
|[[:human_genes:S:SNF8|SNF8]]|-2.19|0.28|
|[[:human_genes:G:GPR137C|GPR137C]]|-2.17|0.41|
|[[:human_genes:N:NHLRC2|NHLRC2]]|-2.16|0.41|
|[[:human_genes:D:DLGAP5|DLGAP5]]|-2.15|0.21|
|[[:human_genes:D:DDX55|DDX55]]|-2.10|0.41|
|[[:human_genes:K:KIF18A|KIF18A]]|-2.10|0.35|
|[[:human_genes:U:UBE2N|UBE2N]]|-2.05|0.29|
|[[:human_genes:T:TBX3|TBX3]]|-2.02|0.33|
|[[:human_genes:S:SPDL1|SPDL1]]|-2.01|0.41|
|[[:human_genes:V:VPS25|VPS25]]|-2.01|0.59|
|[[:human_genes:K:KRTAP13-4|KRTAP13-4]]|-2.00|0.41|
|[[:human_genes:S:SYNE3|SYNE3]]|-1.99|0.35|
|[[:human_genes:P:PSMD14|PSMD14]]|-1.99|0.73|
|[[:human_genes:P:PRMT10|PRMT10]]|-1.98|0.35|
|[[:human_genes:C:CETN1|CETN1]]|1.93|0.62|
|[[:human_genes:K:KIF11|KIF11]]|1.94|0.74|
|[[:human_genes:T:THYN1|THYN1]]|1.94|0.62|
|[[:human_genes:C:COPB2|COPB2]]|1.96|0.65|
|[[:human_genes:Y:YWHAE|YWHAE]]|1.98|0.61|
|[[:human_genes:S:SMR3A|SMR3A]]|1.99|0.62|
|[[:human_genes:K:KIF4A|KIF4A]]|1.99|0.61|
|[[:human_genes:E:EEF1A1|EEF1A1]]|2.00|0.62|
|[[:human_genes:U:UTP20|UTP20]]|2.00|0.63|
|[[:human_genes:P:PLN|PLN]]|2.00|0.66|
|[[:human_genes:F:FARSA|FARSA]]|2.01|0.62|
|[[:human_genes:T:TLE4|TLE4]]|2.03|0.62|
|[[:human_genes:P:POLA1|POLA1]]|2.05|0.65|
|[[:human_genes:E:EIF3E|EIF3E]]|2.05|0.62|
|[[:human_genes:S:SRSF3|SRSF3]]|2.07|0.61|
|[[:human_genes:R:RNF40|RNF40]]|2.07|0.61|
|[[:human_genes:H:HNRNPD|HNRNPD]]|2.07|0.54|
|[[:human_genes:P:POP4|POP4]]|2.08|0.61|
|[[:human_genes:S:SSFA2|SSFA2]]|2.12|0.54|
|[[:human_genes:I:IL6ST|IL6ST]]|2.12|0.54|
|[[:human_genes:P:PI4KA|PI4KA]]|2.13|0.61|
|[[:human_genes:W:WASF1|WASF1]]|2.14|0.54|
|[[:human_genes:D:DAZL|DAZL]]|2.14|0.54|
|[[:human_genes:T:TTLL6|TTLL6]]|2.21|0.54|
|[[:human_genes:V:VAMP4|VAMP4]]|2.23|0.54|
|[[:human_genes:M:MRPL33|MRPL33]]|2.23|0.62|
|[[:human_genes:C:CNN1|CNN1]]|2.25|0.54|
|[[:human_genes:C:CASP8AP2|CASP8AP2]]|2.27|0.62|
|[[:human_genes:W:WDR75|WDR75]]|2.36|0.54|
|[[:human_genes:E:EIF5B|EIF5B]]|2.65|0.62|
^Screen^Correlation^Plot^
|[[:results:exp190|Vincristine 0.0005μM R04 exp190]]|0.051||
|[[:results:exp310|2-Methoxyestradiol 0.55μM R07 exp310]]|0.126||
|[[:results:exp179|Combretastatin A4 0.002 to 0.003μM day4 R04 exp179]]|0.085||
|[[:results:exp162|BI-D1870 2μM R04 exp162]]|0.075||
|[[:results:exp311|2-Methoxyestradiol 0.55 to 0.75μM on day4 R07 exp311]]|0.069||
|[[:results:exp356|Docosahexaenoic-acid 50μM R07 exp356]]|0.067||
|[[:results:exp312|2-Methoxyestradiol 0.55 to 1μM on day4 R07 exp312]]|0.067||
|[[:results:exp184|Ixabepilone 0.004 to 0.005μM on day4 R04 exp184]]|0.067||
|[[:results:exp460|BML-284 0.09μM R08 exp460]]|0.062||
|[[:results:exp517|Quercetin 20μM R08 exp517]]|0.062||
|[[:results:exp243|S-trityl-L-cysteine 0.5μM R05 exp243]]|0.062||
|[[:results:exp217|Mdivi-1 15μM R05 exp217]]|0.059||
|[[:results:exp231|Epothilone-B 0.0015μM R05 exp231]]|0.058||
|[[:results:exp159|Docetaxel 0.001 to 0.002μM on day4 R04 exp159]]|0.056||
|[[:results:exp228|Demecolcine 0.03μM R05 exp228]]|0.055||
|[[:results:exp223|Cabazitaxel 0.001μM R05 exp223]]|0.053||
|[[:results:exp183|IU1-C 25μM R04 exp183]]|0.051||
{{:chemogenomics:comparison_plots:exp107_vs_exp190.png?nolink |}}
{{:chemogenomics:comparison_plots:exp107_vs_exp310.png?nolink |}}
{{:chemogenomics:comparison_plots:exp107_vs_exp179.png?nolink |}}
{{:chemogenomics:comparison_plots:exp107_vs_exp162.png?nolink |}}
{{:chemogenomics:comparison_plots:exp107_vs_exp311.png?nolink |}}
{{:chemogenomics:comparison_plots:exp107_vs_exp356.png?nolink |}}
{{:chemogenomics:comparison_plots:exp107_vs_exp312.png?nolink |}}
{{:chemogenomics:comparison_plots:exp107_vs_exp184.png?nolink |}}
{{:chemogenomics:comparison_plots:exp107_vs_exp460.png?nolink |}}
{{:chemogenomics:comparison_plots:exp107_vs_exp517.png?nolink |}}
{{:chemogenomics:comparison_plots:exp107_vs_exp243.png?nolink |}}
{{:chemogenomics:comparison_plots:exp107_vs_exp217.png?nolink |}}
{{:chemogenomics:comparison_plots:exp107_vs_exp231.png?nolink |}}
{{:chemogenomics:comparison_plots:exp107_vs_exp159.png?nolink |}}
{{:chemogenomics:comparison_plots:exp107_vs_exp228.png?nolink |}}
{{:chemogenomics:comparison_plots:exp107_vs_exp223.png?nolink |}}
{{:chemogenomics:comparison_plots:exp107_vs_exp183.png?nolink |}}
^GO Term^Fold Change^Genes^
|ESCRT II complex|592.11|SNF8,VPS25|
|mitotic sister chromatid segregation|21.61|KNTC1,PRICKLE1,DLGAP5,KIF18A,SPDL1|
|sister chromatid segregation|21.00|KNTC1,PRICKLE1,DLGAP5,KIF18A,SPDL1|
|mitotic nuclear division|18.05|KNTC1,PRICKLE1,DLGAP5,KIF18A,SPDL1|
No GO term hits below threshold. (FDR <0.05)