====== GSK461364A 0.005μM R03 exp125 ======
==== Mechanism of Action ====
Inhibits PLK1
* **Class / Subclass 1:** Signal Transduction / Kinase Inhibitor
* **Class / Subclass 2:** Cell Cycle / Mitotic Inhibitor
==== Technical Notes ====
* **PubChem Name:** %%Gsk-461364%%
* **Synonyms:** GSK461364A
* **CAS #:** 929095-18-1
* **PubChem CID:** [[https://pubchem.ncbi.nlm.nih.gov/compound/15983966|15983966]]
* **IUPAC:** %%5-[6-[(4-methylpiperazin-1-yl)methyl]benzimidazol-1-yl]-3-[(1R)-1-[2-(trifluoromethyl)phenyl]ethoxy]thiophene-2-carboxamide%%
* **INCHI Name:** InChI=1S/C27H28F3N5O2S/c1-17(19-5-3-4-6-20(19)27(28,29)30)37-23-14-24(38-25(23)26(31)36)35-16-32-21-8-7-18(13-22(21)35)15-34-11-9-33(2)10-12-34/h3-8,13-14,16-17H,9-12,15H2,1-2H3,(H2,31,36)/t17-/m1/s1
* **INCHI Key:** ZHJGWYRLJUCMRT-QGZVFWFLSA-N
* **Molecular Weight:** 543.6
* **Canonical SMILES:** CC(C1=CC=CC=C1C(F)(F)F)OC2=C(SC(=C2)N3C=NC4=C3C=C(C=C4)CN5CCN(CC5)C)C(=O)N
* **Isomeric SMILES:** C[C@H](C1=CC=CC=C1C(F)(F)F)OC2=C(SC(=C2)N3C=NC4=C3C=C(C=C4)CN5CCN(CC5)C)C(=O)N
* **Molecular Formula:** C27H28F3N5O2S
{{:chemogenomics:structures:chem-0078.svg?nolink}}
* **Supplier Name:** Med Chem Express
* **Catalog #:** HY-50877
* **Lot #:** CS-0069-03047
* **HRMS (ESI-TOF) m/z:** (M+H)+ Calcd for C27H28F3N5O2S 544.19886; found 544.20114
* **Platform ID:** GSK461364A
* **Min:** 0.3593; **Max:** 95.3469
{{:chemogenomics:dose_response:dr_83.png?nolink&500 |}}
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^ IC ^ Concentration (µM) ^
| IC10 |N/A |
| IC20 |N/A |
| IC30 |0.0022 |
| IC40 |0.0102 |
| IC50 |0.0421 |
| IC60 |N/A |
| IC70 |N/A |
| IC80 |N/A |
| IC90 |N/A |
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==== Screen Summary ====
* **Round**: 03
* **Dose**: 5nM
* **Days of incubation**: 8
* **Doublings**: 6.5
* **Numbers of reads**: 13142837
==== Screen Results ====
^Sensitive/Resistant hits (FDR<0.05)^CRANKS^Score Plot^Top 30 Genes^Screen Similarity^Top 30 Sensitive GO terms^Top 30 Resistant GO terms^
|23/0|[[https://files.tyerslab.com/files/public/chemogenomics/cranks/GSK461364A_0.005uM_Round-3_exp125.txt|Scores]]||||||
{{:chemogenomics:cranks_plots:exp125.png?nolink}}
^Gene^CRANKS Score^FDR^
|[[:human_genes:K:KIF18A|KIF18A]]|-5.81|<0.01|
|[[:human_genes:C:CENPB|CENPB]]|-3.93|<0.01|
|[[:human_genes:M:MLF1IP|MLF1IP]]|-3.87|<0.01|
|[[:human_genes:P:PDS5B|PDS5B]]|-3.68|<0.01|
|[[:human_genes:R:RALGAPB|RALGAPB]]|-3.38|<0.01|
|[[:human_genes:I:IVNS1ABP|IVNS1ABP]]|-3.19|<0.01|
|[[:human_genes:L:LCMT1|LCMT1]]|-3.19|<0.01|
|[[:human_genes:S:SKA1|SKA1]]|-3.18|<0.01|
|[[:human_genes:P:PRR14L|PRR14L]]|-3.08|<0.01|
|[[:human_genes:A:ACTR1B|ACTR1B]]|-2.93|<0.01|
|[[:human_genes:D:DPH1|DPH1]]|-2.92|<0.01|
|[[:human_genes:U:UBE4B|UBE4B]]|-2.84|<0.01|
|[[:human_genes:D:DPH5|DPH5]]|-2.81|<0.01|
|[[:human_genes:G:GCLC|GCLC]]|-2.78|0.01|
|[[:human_genes:A:ACTR1A|ACTR1A]]|-2.77|<0.01|
|[[:human_genes:S:SIN3B|SIN3B]]|-2.65|0.01|
|[[:human_genes:K:KIF15|KIF15]]|-2.61|0.01|
|[[:human_genes:R:RBM38|RBM38]]|-2.58|0.01|
|[[:human_genes:C:CENPQ|CENPQ]]|-2.57|0.01|
|[[:human_genes:C:CENPI|CENPI]]|-2.54|0.19|
|[[:human_genes:K:KLF16|KLF16]]|-2.54|0.07|
|[[:human_genes:E:ELAVL1|ELAVL1]]|-2.53|0.02|
|[[:human_genes:N:N6AMT1|N6AMT1]]|-2.52|0.11|
|[[:human_genes:D:DDX39A|DDX39A]]|-2.48|0.02|
|[[:human_genes:C:CENPA|CENPA]]|-2.46|0.05|
|[[:human_genes:C:CENPL|CENPL]]|-2.44|0.05|
|[[:human_genes:C:CCNB1|CCNB1]]|-2.43|0.03|
|[[:human_genes:C:CENPM|CENPM]]|-2.37|0.43|
|[[:human_genes:N:NPRL2|NPRL2]]|-2.37|0.07|
|[[:human_genes:T:TPX2|TPX2]]|-2.34|0.19|
|[[:human_genes:M:MAD1L1|MAD1L1]]|2.03|0.35|
|[[:human_genes:U:UBE2J1|UBE2J1]]|2.04|0.26|
|[[:human_genes:P:PSMC3|PSMC3]]|2.04|0.60|
|[[:human_genes:M:METTL5|METTL5]]|2.05|0.26|
|[[:human_genes:D:DNAJB9|DNAJB9]]|2.06|0.26|
|[[:human_genes:B:BIRC6|BIRC6]]|2.07|0.26|
|[[:human_genes:S:SUMO1|SUMO1]]|2.08|0.49|
|[[:human_genes:T:TMEM55B|TMEM55B]]|2.09|0.26|
|[[:human_genes:I:IQCD|IQCD]]|2.09|0.26|
|[[:human_genes:C:CCDC63|CCDC63]]|2.10|0.26|
|[[:human_genes:A:APOH|APOH]]|2.11|0.26|
|[[:human_genes:P:POLR1E|POLR1E]]|2.13|0.26|
|[[:human_genes:G:GGA3|GGA3]]|2.14|0.28|
|[[:human_genes:S:SLU7|SLU7]]|2.15|0.47|
|[[:human_genes:C:C2orf66|C2orf66]]|2.16|0.26|
|[[:human_genes:P:PPM1G|PPM1G]]|2.17|0.26|
|[[:human_genes:P:PPM1A|PPM1A]]|2.18|0.26|
|[[:human_genes:C:CDC45|CDC45]]|2.20|0.63|
|[[:human_genes:P:POLD3|POLD3]]|2.20|0.66|
|[[:human_genes:R:RPS23|RPS23]]|2.22|0.26|
|[[:human_genes:E:ENY2|ENY2]]|2.22|0.26|
|[[:human_genes:R:RPL18A|RPL18A]]|2.25|0.26|
|[[:human_genes:R:RND3|RND3]]|2.27|0.25|
|[[:human_genes:R:RASA1|RASA1]]|2.28|0.26|
|[[:human_genes:T:TFAP4|TFAP4]]|2.38|0.16|
|[[:human_genes:S:SYNCRIP|SYNCRIP]]|2.43|0.30|
|[[:human_genes:O:OR5K3|OR5K3]]|2.55|0.16|
|[[:human_genes:O:OR3A2|OR3A2]]|2.56|0.16|
|[[:human_genes:X:XPR1|XPR1]]|2.68|0.11|
|[[:human_genes:G:GIPR|GIPR]]|2.78|0.11|
^Screen^Correlation^Plot^
|[[:results:exp190|Vincristine 0.0005μM R04 exp190]]|0.07||
|[[:results:exp243|S-trityl-L-cysteine 0.5μM R05 exp243]]|0.051||
|[[:results:exp95|BI-2536 0.0042μM R03 exp95]]|0.129||
|[[:results:exp97|BI-6727 0.0125μM R03 exp97]]|0.119||
|[[:results:exp162|BI-D1870 2μM R04 exp162]]|0.06||
|[[:results:exp228|Demecolcine 0.03μM R05 exp228]]|0.058||
|[[:results:exp179|Combretastatin A4 0.002 to 0.003μM day4 R04 exp179]]|0.056||
{{:chemogenomics:comparison_plots:exp125_vs_exp190.png?nolink |}}
{{:chemogenomics:comparison_plots:exp125_vs_exp243.png?nolink |}}
{{:chemogenomics:comparison_plots:exp125_vs_exp95.png?nolink |}}
{{:chemogenomics:comparison_plots:exp125_vs_exp97.png?nolink |}}
{{:chemogenomics:comparison_plots:exp125_vs_exp162.png?nolink |}}
{{:chemogenomics:comparison_plots:exp125_vs_exp228.png?nolink |}}
{{:chemogenomics:comparison_plots:exp125_vs_exp179.png?nolink |}}
^GO Term^Fold Change^Genes^
|inner kinetochore|139.32|CENPU,CENPQ,CENPL,CENPM|
|condensed chromosome, centromeric region|33.83|KIF18A,CENPB,CENPU,SKA1,CENPQ,CENPI,CENPA,CENPL,CCNB1,CENPM|
|kinetochore|28.88|KIF18A,CENPU,SKA1,CENPQ,CENPI,CENPL,CCNB1,CENPM|
|chromosome, centromeric region|27.60|KIF18A,CENPB,CENPU,PDS5B,SKA1,CENPQ,CENPI,CENPA,CENPL,CCNB1,CENPM|
|condensed chromosome|21.77|KIF18A,CENPB,CENPU,SKA1,CENPQ,CENPI,CENPA,CENPL,CCNB1,CENPM|
|chromosomal region|17.41|KIF18A,CENPB,CENPU,PDS5B,SKA1,CENPQ,CENPI,CENPA,CENPL,CCNB1,CENPM|
|chromosome segregation|14.44|KIF18A,CENPU,SKA1,CENPQ,CENPI,CENPL,CCNB1,CENPM|
|cell cycle process|7.46|KIF18A,CENPU,PDS5B,LCMT1,SKA1,CENPQ,CENPI,CENPA,CENPL,CCNB1,CENPM|
No GO term hits below threshold. (FDR <0.05)