======= PSMD1 ======= == Gene Information == * **Official Symbol**: PSMD1 * **Official Name**: proteasome 26S subunit, non-ATPase 1 * **Aliases and Previous Symbols**: N/A * **Entrez ID**: [[https://www.ncbi.nlm.nih.gov/gene/?term=5707|5707]] * **UniProt**: [[https://www.uniprot.org/uniprot/Q99460|Q99460]] * **Interactions**: [[https://thebiogrid.org/search.php?search=PSMD1&organism=9606|BioGRID]] * **PubMed articles**: [[https://www.ncbi.nlm.nih.gov/pubmed/?term=gene%20PSMD1|Open PubMed]] * **OMIM**: [[https://omim.org/entry/617842|Open OMIM]] == Function Summary == * **Entrez Summary**: N/A * **UniProt Summary**: N/A |PC rep| |proteasome storage granule| |proteasome regulatory particle| |proteasome regulatory particle, base subcomplex| |enzyme regulator activity| |proteasome accessory complex| |proteasome complex| |regulation of cellular amino acid metabolic process| |regulation of hematopoietic stem cell differentiation| |antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent| |endopeptidase activity| |regulation of transcription from RNA polymerase II promoter in response to hypoxia| |antigen processing and presentation of exogenous peptide antigen via MHC class I| |NIK/NF-kappaB signaling| |regulation of cellular amine metabolic process| |anaphase-promoting complex-dependent catabolic process| |regulation of hematopoietic progenitor cell differentiation| |negative regulation of G2/M transition of mitotic cell cycle| |azurophil granule lumen| |SCF-dependent proteasomal ubiquitin-dependent protein catabolic process| |interleukin-1-mediated signaling pathway| |Wnt signaling pathway, planar cell polarity pathway| |antigen processing and presentation of peptide antigen via MHC class I| |negative regulation of cell cycle G2/M phase transition| |regulation of establishment of planar polarity| |stimulatory C-type lectin receptor signaling pathway| |innate immune response activating cell surface receptor signaling pathway| |regulation of stem cell differentiation| |tumor necrosis factor-mediated signaling pathway| |regulation of transcription from RNA polymerase II promoter in response to stress| |regulation of DNA-templated transcription in response to stress| |non-canonical Wnt signaling pathway| |positive regulation of canonical Wnt signaling pathway| |regulation of cellular ketone metabolic process| |Fc-epsilon receptor signaling pathway| |cellular response to interleukin-1| |negative regulation of canonical Wnt signaling pathway| |T cell receptor signaling pathway| |antigen processing and presentation of exogenous peptide antigen| |positive regulation of Wnt signaling pathway| |regulation of mRNA stability| |regulation of morphogenesis of an epithelium| |antigen processing and presentation of exogenous antigen| |regulation of RNA stability| |cellular response to hypoxia| |antigen processing and presentation of peptide antigen| |regulation of G2/M transition of mitotic cell cycle| |cellular response to decreased oxygen levels| |response to interleukin-1| |regulation of mRNA catabolic process| |negative regulation of Wnt signaling pathway| |regulation of cell cycle G2/M phase transition| |negative regulation of mitotic cell cycle phase transition| |cellular response to oxygen levels| |antigen processing and presentation| |negative regulation of cell cycle phase transition| |innate immune response-activating signal transduction| |cellular response to tumor necrosis factor| |Fc receptor signaling pathway| |regulation of animal organ morphogenesis| |activation of innate immune response| |response to tumor necrosis factor| |protein deubiquitination| |regulation of canonical Wnt signaling pathway| |ubiquitin protein ligase binding| |antigen receptor-mediated signaling pathway| |protein modification by small protein removal| |protein polyubiquitination| |negative regulation of mitotic cell cycle| |proteasome-mediated ubiquitin-dependent protein catabolic process| |negative regulation of cell cycle process| |regulation of mRNA metabolic process| |positive regulation of innate immune response| |response to hypoxia| |proteasomal protein catabolic process| |Wnt signaling pathway| |cell-cell signaling by wnt| |response to decreased oxygen levels| |regulation of Wnt signaling pathway| |post-translational protein modification| |positive regulation of response to biotic stimulus| |MAPK cascade| |response to oxygen levels| |regulation of protein catabolic process| |signal transduction by protein phosphorylation| |regulation of mitotic cell cycle phase transition| |cell surface receptor signaling pathway involved in cell-cell signaling| |regulation of small molecule metabolic process| |regulation of cell cycle phase transition| |immune response-activating cell surface receptor signaling pathway| |regulation of hemopoiesis| |regulation of innate immune response| |positive regulation of defense response| |immune response-regulating cell surface receptor signaling pathway| |neutrophil degranulation| |neutrophil activation involved in immune response| |neutrophil mediated immunity| |neutrophil activation| |granulocyte activation| |positive regulation of multi-organism process| |leukocyte degranulation| |myeloid leukocyte mediated immunity| |myeloid cell activation involved in immune response| |regulation of response to biotic stimulus| |posttranscriptional regulation of gene expression| |ubiquitin-dependent protein catabolic process| |modification-dependent protein catabolic process| |modification-dependent macromolecule catabolic process| |immune response-activating signal transduction| |negative regulation of cell cycle| |myeloid leukocyte activation| |proteolysis involved in cellular protein catabolic process| |immune response-regulating signaling pathway| |positive regulation of response to external stimulus| |cellular protein catabolic process| |leukocyte activation involved in immune response| |cell activation involved in immune response| |activation of immune response| |regulation of mitotic cell cycle| |cytokine-mediated signaling pathway| |protein catabolic process| |protein ubiquitination| |regulated exocytosis| |regulation of cell cycle process| |regulation of defense response| |leukocyte mediated immunity| |protein modification by small protein conjugation| |regulation of multi-organism process| |exocytosis| |regulation of cellular catabolic process| |positive regulation of immune response| |cellular macromolecule catabolic process| |leukocyte activation| |protein phosphorylation| |protein modification by small protein conjugation or removal| |regulation of catabolic process| |secretion by cell| |cellular response to cytokine stimulus| |export from cell| |macromolecule catabolic process| |organonitrogen compound catabolic process| |regulation of anatomical structure morphogenesis| |cell activation| |immune effector process| |regulation of response to external stimulus| |response to cytokine| |cell-cell signaling| |secretion| |regulation of immune response| |positive regulation of immune system process| |response to abiotic stimulus| |regulation of cell cycle| |negative regulation of signal transduction| |proteolysis| |transmembrane transport| |phosphorylation| |negative regulation of cell communication| |negative regulation of signaling| |regulation of response to stress| |negative regulation of response to stimulus| |positive regulation of signal transduction| |regulation of immune system process| |intracellular signal transduction| |cellular response to stress| |organic substance catabolic process| |cellular catabolic process| |regulation of cell differentiation| |positive regulation of cell communication| |positive regulation of signaling| |immune response| |extracellular region| |vesicle-mediated transport| |membrane| \\ === CRISPR Data === ^Screen^Score^ |[[:results:exp19|Etoposide 1μM R00 exp19]]|-2.58| |[[:results:exp450|Artemisinin 50μM R08 exp450]]|-2.49| |[[:results:exp459|Bleomycin 5μM R08 exp459]]|-2.06| |[[:results:exp503|Mitomycin-C 0.06μM R08 exp503]]|-1.87| |[[:results:exp474|CR131-b 0.005μM R08 exp474]]|-1.78| |[[:results:exp219|A-395N 10μM R05 exp219]]|1.72| |[[:results:exp348|Cyclosporin-A 3μM R07 exp348]]|1.75| |[[:results:exp239|PFI-2 4μM R05 exp239]]|1.76| |[[:results:exp13|Chloramphenicol 20μM R00 exp13]]|1.78| |[[:results:exp141|Nifurtimox 1μM R03 exp141]]|1.79| |[[:results:exp156|UNC2400 2μM R03 exp156]]|1.79| |[[:results:exp351|Dexamethasone 0.006μM R07 exp351]]|1.81| |[[:results:exp316|Geldanamycin 0.015 to 0.025μM on day4 R07 exp316]]|1.81| |[[:results:exp123|GSK-LSD1 10μM R03 exp123]]|1.85| |[[:results:exp287|HMS-I2 5μM R06 exp287]]|1.85| |[[:results:exp31|Rifampicin 1μM R00 exp31]]|1.88| |[[:results:exp283|Glyphosate 1000μM R06 exp283]]|1.9| |[[:results:exp389|PF-06409577 20μM R07 exp389]]|1.95| |[[:results:exp376|Losmapimod 1μM R07 exp376]]|1.96| |[[:results:exp223|Cabazitaxel 0.001μM R05 exp223]]|2.07| |[[:results:exp16|DABN 2μM R00 exp16]]|2.12| |[[:results:exp61|YM155 0.0002μM R01 exp61]]|2.14| |[[:results:exp15|Cycloheximide 0.2μM R00 exp15]]|2.15| |[[:results:exp392|PT-1 25μM R07 exp392]]|2.19| |[[:results:exp238|Parthenolide 2.5μM R05 exp238]]|2.27| |[[:results:exp418|Tunicamycin 0.04μM R07 exp418]]|2.31| |[[:results:exp235|Geldanamycin 0.01μM R05 exp235]]|2.45| |[[:results:exp38|Wortmannin 5μM R00 exp38]]|2.45| |[[:results:exp50|Nicotinamide 2000μM R01 exp50]]|2.52| |[[:results:exp58|UM131593 0.1μM R01 exp58]]|2.61| |[[:results:exp14|Cycloheximide 0.02μM R00 exp14]]|2.78| |[[:results:exp36|TRAIL 50ng/ml R00 exp36]]|2.81| |[[:results:exp32|Rifampicin 10μM R00 exp32]]|2.93| |[[:results:exp11|CCCP 1μM R00 exp11]]|3.14| ^Gene^Correlation^ |[[:human genes:z:zfand5|ZFAND5]]|0.591| |[[:human genes:v:vasn|VASN]]|0.588| |[[:human genes:p:psmd11|PSMD11]]|0.573| |[[:human genes:s:smg1|SMG1]]|0.568| |[[:human genes:d:ddtl|DDTL]]|0.567| |[[:human genes:p:psmc1|PSMC1]]|0.565| |[[:human genes:p:psmd3|PSMD3]]|0.563| |[[:human genes:p:psmd13|PSMD13]]|0.561| |[[:human genes:h:hap1|HAP1]]|0.547| |[[:human genes:m:mt1e|MT1E]]|0.539| |[[:human genes:s:smg7|SMG7]]|0.539| |[[:human genes:r:rps28|RPS28]]|0.535| |[[:human genes:n:nupl1|NUPL1]]|0.534| |[[:human genes:s:scaf1|SCAF1]]|0.534| |[[:human genes:p:pan3|PAN3]]|0.534| |[[:human genes:a:atp13a1|ATP13A1]]|0.532| |[[:human genes:p:psmb4|PSMB4]]|0.532| |[[:human genes:p:psma6|PSMA6]]|0.531| |[[:human genes:r:rad21|RAD21]]|0.53| |[[:human genes:z:znf106|ZNF106]]|0.529| |[[:human genes:b:bcl2l1|BCL2L1]]|0.526| |[[:human genes:p:psmb1|PSMB1]]|0.526| |[[:human genes:t:tceb3cl2|TCEB3CL2]]|0.524| |[[:human genes:l:lrr1|LRR1]]|0.524| |[[:human genes:k:kctd17|KCTD17]]|0.522| |[[:human genes:p:psmc6|PSMC6]]|0.52| |[[:human genes:c:cdc45|CDC45]]|0.514| |[[:human genes:u:upf1|UPF1]]|0.513| |[[:human genes:s:ssh2|SSH2]]|0.512| |[[:human genes:c:cdc73|CDC73]]|0.512| |[[:human genes:d:dnm2|DNM2]]|0.512| |[[:human genes:i:igfn1|IGFN1]]|0.511| |[[:human genes:t:terf2|TERF2]]|0.511| |[[:human genes:r:rrm1|RRM1]]|0.507| |[[:human genes:p:psma7|PSMA7]]|0.505| |[[:human genes:r:rps9|RPS9]]|0.505| |[[:human genes:s:supt6h|SUPT6H]]|0.503| |[[:human genes:c:ccna2|CCNA2]]|0.503| |[[:human genes:n:nup54|NUP54]]|0.502| |[[:human genes:r:rps2|RPS2]]|0.501| |[[:human genes:t:twistnb|TWISTNB]]|0.5| |[[:human genes:t:tbc1d3g|TBC1D3G]]|0.5| |[[:human genes:r:rpsa|RPSA]]|0.499| |[[:human genes:p:pole|POLE]]|0.498| |[[:human genes:s:snrpa1|SNRPA1]]|0.497| |[[:human genes:p:psmd6|PSMD6]]|0.497| |[[:human genes:p:psmc2|PSMC2]]|0.497| |[[:human genes:s:smg5|SMG5]]|0.493| |[[:human genes:p:psma1|PSMA1]]|0.493| |[[:human genes:r:rps12|RPS12]]|0.492| |[[:human genes:p:psmd2|PSMD2]]|0.491| |[[:human genes:t:tceb3cl|TCEB3CL]]|0.49| |[[:human genes:c:ccdc94|CCDC94]]|0.49| |[[:human genes:w:wdr87|WDR87]]|0.489| |[[:human genes:p:paf1|PAF1]]|0.489| |[[:human genes:r:rrp15|RRP15]]|0.489| |[[:human genes:t:tceb3c|TCEB3C]]|0.487| |[[:human genes:c:cope|COPE]]|0.486| |[[:human genes:p:psmc4|PSMC4]]|0.484| |[[:human genes:a:akirin2|AKIRIN2]]|0.483| |[[:human genes:m:myo1h|MYO1H]]|0.483| |[[:human genes:s:sfpq|SFPQ]]|0.482| |[[:human genes:n:narfl|NARFL]]|0.477| |[[:human genes:t:tbc1d3c|TBC1D3C]]|0.477| |[[:human genes:t:tbc1d3f|TBC1D3F]]|0.475| |[[:human genes:m:med17|MED17]]|0.472| |[[:human genes:t:tbc1d3h|TBC1D3H]]|0.471| |[[:human genes:d:dtl|DTL]]|0.47| |[[:human genes:c:ckap5|CKAP5]]|0.47| |[[:human genes:h:hist1h2be|HIST1H2BE]]|0.47| |[[:human genes:k:kpnb1|KPNB1]]|0.469| |[[:human genes:c:cwc22|CWC22]]|0.469| |[[:human genes:t:top1mt|TOP1MT]]|0.469| |[[:human genes:c:c1qtnf9b|C1QTNF9B]]|0.469| |[[:human genes:c:c14orf93|C14orf93]]|0.468| |[[:human genes:p:polr2j3|POLR2J3]]|0.467| |[[:human genes:r:rpl35|RPL35]]|0.467| |[[:human genes:d:dnttip2|DNTTIP2]]|0.467| |[[:human genes:c:cdca3|CDCA3]]|0.467| |[[:human genes:a:ankle2|ANKLE2]]|0.467| |[[:human genes:m:mdm2|MDM2]]|0.467| |[[:human genes:p:psmd14|PSMD14]]|0.466| |[[:human genes:f:fbxo5|FBXO5]]|0.466| |[[:human genes:p:pwp2|PWP2]]|0.464| |[[:human genes:a:ahctf1|AHCTF1]]|0.464| |[[:human genes:p:psmc3|PSMC3]]|0.464| |[[:human genes:r:rrn3|RRN3]]|0.462| |[[:human genes:o:orc1|ORC1]]|0.461| |[[:human genes:s:s1pr4|S1PR4]]|0.46| |[[:human genes:r:rpl26|RPL26]]|0.46| |[[:human genes:d:ddt|DDT]]|0.458| |[[:human genes:a:arcn1|ARCN1]]|0.457| |[[:human genes:c:chd4|CHD4]]|0.457| |[[:human genes:t:tbc1d3i|TBC1D3I]]|0.455| |[[:human genes:t:tbc1d3e|TBC1D3E]]|0.454| |[[:human genes:p:psmd7|PSMD7]]|0.454| |[[:human genes:t:tbc1d3k|TBC1D3K]]|0.454| |[[:human genes:t:tbc1d3l|TBC1D3L]]|0.453| |[[:human genes:r:rbbp5|RBBP5]]|0.452| |[[:human genes:a:adrm1|ADRM1]]|0.45| |[[:human genes:c:chmp2a|CHMP2A]]|0.448| |[[:human genes:r:rilpl1|RILPL1]]|0.448| |[[:human genes:p:psmb2|PSMB2]]|0.447| |[[:human genes:n:nop16|NOP16]]|0.447| |[[:human genes:a:atxn1|ATXN1]]|0.447| |[[:human genes:s:sf3a1|SF3A1]]|0.446| |[[:human genes:r:rps19|RPS19]]|0.446| |[[:human genes:c:cmya5|CMYA5]]|0.445| |[[:human genes:h:hivep3|HIVEP3]]|0.445| |[[:human genes:d:dync1i2|DYNC1I2]]|0.445| |[[:human genes:p:pola2|POLA2]]|0.444| |[[:human genes:t:ticrr|TICRR]]|0.443| |[[:human genes:i:iscu|ISCU]]|0.443| |[[:human genes:n:nbpf10|NBPF10]]|0.443| |[[:human genes:n:nol12|NOL12]]|0.442| |[[:human genes:w:wdr43|WDR43]]|0.442| |[[:human genes:m:myb|MYB]]|0.442| |[[:human genes:n:nbpf16|NBPF16]]|0.44| |[[:human genes:n:nol8|NOL8]]|0.44| |[[:human genes:i:ints5|INTS5]]|0.439| |[[:human genes:l:lad1|LAD1]]|0.439| |[[:human genes:u:utp20|UTP20]]|0.437| |[[:human genes:o:ogfr|OGFR]]|0.437| |[[:human genes:c:cox8a|COX8A]]|0.436| |[[:human genes:n:ndc1|NDC1]]|0.436| |[[:human genes:r:ranbp2|RANBP2]]|0.435| |[[:human genes:r:rbm39|RBM39]]|0.435| |[[:human genes:d:disp2|DISP2]]|0.434| |[[:human genes:g:golga8j|GOLGA8J]]|0.434| |[[:human genes:p:pan2|PAN2]]|0.434| |[[:human genes:c:cdt1|CDT1]]|0.433| |[[:human genes:t:tbc1d3|TBC1D3]]|0.433| |[[:human genes:n:npipb8|NPIPB8]]|0.433| |[[:human genes:p:prpf8|PRPF8]]|0.432| |[[:human genes:r:rps20|RPS20]]|0.432| |[[:human genes:c:cbwd5|CBWD5]]|0.431| |[[:human genes:h:hist2h3a|HIST2H3A]]|0.431| |[[:human genes:h:hist2h3c|HIST2H3C]]|0.431| |[[:human genes:u:usp36|USP36]]|0.431| |[[:human genes:t:tra2b|TRA2B]]|0.43| |[[:human genes:c:ctr9|CTR9]]|0.429| |[[:human genes:a:a2ml1|A2ML1]]|0.429| |[[:human genes:f:fam160a1|FAM160A1]]|0.429| |[[:human genes:n:nup133|NUP133]]|0.428| |[[:human genes:c:ccdc64b|CCDC64B]]|0.428| |[[:human genes:s:sec13|SEC13]]|0.428| |[[:human genes:n:nup160|NUP160]]|0.427| |[[:human genes:b:bysl|BYSL]]|0.427| |[[:human genes:r:rps19bp1|RPS19BP1]]|0.423| |[[:human genes:s:slc38a7|SLC38A7]]|0.423| |[[:human genes:p:pop1|POP1]]|0.423| |[[:human genes:s:snip1|SNIP1]]|0.423| |[[:human genes:t:traip|TRAIP]]|0.423| |[[:human genes:d:ddx21|DDX21]]|0.423| |[[:human genes:f:fbxw9|FBXW9]]|0.422| |[[:human genes:p:psmc5|PSMC5]]|0.422| |[[:human genes:z:znf830|ZNF830]]|0.422| |[[:human genes:a:aaas|AAAS]]|0.421| |[[:human genes:e:exosc5|EXOSC5]]|0.42| |[[:human genes:r:rnf113a|RNF113A]]|0.42| |[[:human genes:r:rad51|RAD51]]|0.419| |[[:human genes:c:copg1|COPG1]]|0.419| |[[:human genes:n:nup43|NUP43]]|0.419| |[[:human genes:c:ciapin1|CIAPIN1]]|0.419| |[[:human genes:g:golga6l6|GOLGA6L6]]|0.419| |[[:human genes:b:btk|BTK]]|0.419| |[[:human genes:m:madcam1|MADCAM1]]|0.418| |[[:human genes:c:ccdc116|CCDC116]]|0.417| |[[:human genes:r:rps5|RPS5]]|0.417| |[[:human genes:c:cdc6|CDC6]]|0.417| |[[:human genes:a:akap1|AKAP1]]|0.417| |[[:human genes:s:slc4a1|SLC4A1]]|0.416| |[[:human genes:c:csnk1a1|CSNK1A1]]|0.415| |[[:human genes:c:cbwd3|CBWD3]]|0.415| |[[:human genes:r:rpl30|RPL30]]|0.414| |[[:human genes:r:rpl8|RPL8]]|0.414| |[[:human genes:s:sel1l|SEL1L]]|0.414| |[[:human genes:x:xylt2|XYLT2]]|0.414| |[[:human genes:r:rpl34|RPL34]]|0.413| |[[:human genes:d:ddx56|DDX56]]|0.413| |[[:human genes:k:krt36|KRT36]]|0.413| |[[:human genes:t:tspy8|TSPY8]]|0.413| |[[:human genes:c:clptm1|CLPTM1]]|0.412| |[[:human genes:n:naaladl1|NAALADL1]]|0.412| |[[:human genes:c:cgb2|CGB2]]|0.411| |[[:human genes:o:orc6|ORC6]]|0.411| |[[:human genes:n:nip7|NIP7]]|0.411| |[[:human genes:p:psmb3|PSMB3]]|0.41| |[[:human genes:p:pdcd11|PDCD11]]|0.409| |[[:human genes:s:syt9|SYT9]]|0.407| |[[:human genes:p:ppfia4|PPFIA4]]|0.406| |[[:human genes:s:srsf1|SRSF1]]|0.405| |[[:human genes:w:wdr75|WDR75]]|0.405| |[[:human genes:r:rpl38|RPL38]]|0.405| |[[:human genes:r:rps14|RPS14]]|0.404| |[[:human genes:s:sf3a3|SF3A3]]|0.404| |[[:human genes:z:znf655|ZNF655]]|0.404| |[[:human genes:r:rfxank|RFXANK]]|0.404| |[[:human genes:g:gnb3|GNB3]]|0.404| |[[:human genes:i:ints6|INTS6]]|0.403| |[[:human genes:c:col2a1|COL2A1]]|0.402| |[[:human genes:n:npipb5|NPIPB5]]|0.401| |[[:human genes:m:myt1l|MYT1L]]|0.401| |[[:human genes:e:exosc9|EXOSC9]]|0.4| |[[:human genes:c:copb1|COPB1]]|0.4| Global Fraction of Cell Lines Where Essential: 614/739 ^Tissue^Fraction Of Cell Lines Where Essential^ |1290807.0|1/1| |909776.0|1/1| |bile duct|24/28| |blood|26/28| |bone|20/26| |breast|29/33| |central nervous system|47/56| |cervix|4/4| |colorectal|15/17| |esophagus|12/13| |fibroblast|1/1| |gastric|13/16| |kidney|16/21| |liver|18/20| |lung|57/75| |lymphocyte|13/16| |ovary|24/26| |pancreas|19/24| |peripheral nervous system|14/16| |plasma cell|14/15| |prostate|1/1| |skin|23/24| |soft tissue|5/9| |thyroid|2/2| |upper aerodigestive|18/22| |urinary tract|21/29| |uterus|4/5| == Essentiality in NALM6 == * **Essentiality Rank**: 249 * **Expression level (log2 read counts)**: 7.37 {{:chemogenomics:nalm6 dist.png?nolink |}}