====== 3-Bromopyruvate 7μM R04 exp175 ====== ==== Mechanism of Action ==== Inhibits hexokinase II, pyruvate analog, enzyme alkylator, blocks glycolysis * **Class / Subclass 1:** Metabolism / Metabolic Enzyme Inhibitor ==== Technical Notes ==== * **PubChem Name:** %%Bromopyruvic acid%% * **Synonyms:** Bromopyruvic acid; Hexokinase II Inhibitor II, 3-BP; Bromopyruvic acid;Hexokinase II Inhibitor II, 3-BP * **CAS #:** 1113-59-3 * **PubChem CID:** [[https://pubchem.ncbi.nlm.nih.gov/compound/70684|70684]] * **IUPAC:** %%3-bromo-2-oxopropanoic acid%% * **INCHI Name:** InChI=1S/C3H3BrO3/c4-1-2(5)3(6)7/h1H2,(H,6,7) * **INCHI Key:** PRRZDZJYSJLDBS-UHFFFAOYSA-N * **Molecular Weight:** 166.96 * **Canonical SMILES:** C(C(=O)C(=O)O)Br * **Isomeric SMILES:** N/A * **Molecular Formula:** C3H3BrO3 {{:chemogenomics:structures:chem-0109.svg?nolink}} * **Supplier Name:** Lancaster * **Catalog #:** L00720 * **Lot #:** 10039674 * **HRMS (ESI-TOF) m/z:** (M-H)- Calcd for C3 H3 Br O3 164.91928; found 164.91875 * **Platform ID:** 3-BrPA * **Min:** -11.1281; **Max:** 98.9907 {{:chemogenomics:dose_response:dr_177.png?nolink&500 |}} \\ \\ \\ \\ |< 300px 100px 200px >| ^ IC ^ Concentration (µM) ^ | IC10 |N/A | | IC20 |6.8291 | | IC30 |7.0416 | | IC40 |7.2208 | | IC50 |7.3892 | | IC60 |N/A | | IC70 |N/A | | IC80 |N/A | | IC90 |N/A | \\ ==== Screen Summary ==== * **Round**: 04 * **Dose**: 7µM * **Days of incubation**: 8 * **Doublings**: 3.9 * **Numbers of reads**: 14365188 ==== Screen Results ==== ^Sensitive/Resistant hits (FDR<0.05)^CRANKS^Score Plot^Top 30 Genes^Screen Similarity^Top 30 Sensitive GO terms^Top 30 Resistant GO terms^ |21/50|[[https://files.tyerslab.com/files/public/chemogenomics/cranks/3-Bromopyruvate_7uM_Round-4_exp175.txt|Scores]]|||||| {{:chemogenomics:cranks_plots:exp175.png?nolink}} ^Gene^CRANKS Score^FDR^ |[[:human_genes:G:GCLM|GCLM]]|-4.10|<0.01| |[[:human_genes:N:NPRL2|NPRL2]]|-3.99|<0.01| |[[:human_genes:U:UBE2H|UBE2H]]|-3.60|<0.01| |[[:human_genes:O:OSGIN2|OSGIN2]]|-3.54|<0.01| |[[:human_genes:N:NPRL3|NPRL3]]|-3.54|<0.01| |[[:human_genes:S:SZT2|SZT2]]|-3.53|<0.01| |[[:human_genes:H:HEXIM1|HEXIM1]]|-3.27|<0.01| |[[:human_genes:C:CHD1|CHD1]]|-3.22|<0.01| |[[:human_genes:T:TNFAIP3|TNFAIP3]]|-3.12|<0.01| |[[:human_genes:W:WDR26|WDR26]]|-3.09|<0.01| |[[:human_genes:M:MSI2|MSI2]]|-3.05|<0.01| |[[:human_genes:P:PRKAG1|PRKAG1]]|-2.99|<0.01| |[[:human_genes:I:INTS12|INTS12]]|-2.90|<0.01| |[[:human_genes:D:DHX36|DHX36]]|-2.84|<0.01| |[[:human_genes:G:GID8|GID8]]|-2.76|<0.01| |[[:human_genes:Y:YPEL5|YPEL5]]|-2.66|<0.01| |[[:human_genes:M:MSL2|MSL2]]|-2.64|<0.01| |[[:human_genes:S:SEPHS1|SEPHS1]]|-2.63|<0.01| |[[:human_genes:D:DEPDC5|DEPDC5]]|-2.60|0.01| |[[:human_genes:P:PDS5B|PDS5B]]|-2.58|0.01| |[[:human_genes:G:G3BP1|G3BP1]]|-2.44|0.03| |[[:human_genes:K:KIAA0391|KIAA0391]]|-2.36|0.07| |[[:human_genes:D:DDX6|DDX6]]|-2.34|0.10| |[[:human_genes:R:RBM26|RBM26]]|-2.34|0.10| |[[:human_genes:C:C12orf66|C12orf66]]|-2.31|0.05| |[[:human_genes:K:KIAA1210|KIAA1210]]|-2.27|0.06| |[[:human_genes:T:TRAF2|TRAF2]]|-2.27|0.09| |[[:human_genes:A:ATG9A|ATG9A]]|-2.26|0.19| |[[:human_genes:S:STT3A|STT3A]]|-2.26|0.13| |[[:human_genes:N:NCOR1|NCOR1]]|-2.25|0.07| |[[:human_genes:T:TBC1D3K|TBC1D3K]]|2.62|0.18| |[[:human_genes:C:CCDC101|CCDC101]]|2.64|0.01| |[[:human_genes:C:CCNC|CCNC]]|2.70|<0.01| |[[:human_genes:S:SP1|SP1]]|2.74|<0.01| |[[:human_genes:H:HECTD1|HECTD1]]|2.76|<0.01| |[[:human_genes:C:CDK2|CDK2]]|2.76|<0.01| |[[:human_genes:W:WDR20|WDR20]]|2.82|<0.01| |[[:human_genes:N:NRBP1|NRBP1]]|2.85|0.01| |[[:human_genes:K:KAT2A|KAT2A]]|2.95|<0.01| |[[:human_genes:M:MED13|MED13]]|2.98|<0.01| |[[:human_genes:I:ID3|ID3]]|3.00|<0.01| |[[:human_genes:T:TADA1|TADA1]]|3.05|<0.01| |[[:human_genes:M:MIOS|MIOS]]|3.12|<0.01| |[[:human_genes:A:AHCYL1|AHCYL1]]|3.20|<0.01| |[[:human_genes:M:MED13L|MED13L]]|3.21|<0.01| |[[:human_genes:S:SLFN11|SLFN11]]|3.25|<0.01| |[[:human_genes:W:WDR24|WDR24]]|3.26|<0.01| |[[:human_genes:V:VPS29|VPS29]]|3.28|<0.01| |[[:human_genes:P:POLR2J|POLR2J]]|3.31|0.04| |[[:human_genes:T:TADA2B|TADA2B]]|3.32|<0.01| |[[:human_genes:M:MLST8|MLST8]]|3.36|<0.01| |[[:human_genes:T:TAF5L|TAF5L]]|3.53|<0.01| |[[:human_genes:S:SUPT7L|SUPT7L]]|3.56|<0.01| |[[:human_genes:B:BRPF1|BRPF1]]|3.66|<0.01| |[[:human_genes:B:BIRC6|BIRC6]]|4.12|<0.01| |[[:human_genes:S:SLC16A1|SLC16A1]]|4.17|<0.01| |[[:human_genes:U:UBA6|UBA6]]|5.20|<0.01| |[[:human_genes:B:BSG|BSG]]|5.40|<0.01| |[[:human_genes:S:SNX27|SNX27]]|5.52|<0.01| |[[:human_genes:F:FBXO11|FBXO11]]|5.60|<0.01| ^Screen^Correlation^Plot^ |[[:results:exp106|UM131593 0.2μM R03 exp106]]|0.096|| |[[:results:exp517|Quercetin 20μM R08 exp517]]|0.087|| |[[:results:exp500|LY2090314 0.003μM R08 exp500 no dilution day6]]|0.081|| |[[:results:exp36|TRAIL 50ng/ml R00 exp36]]|0.078|| |[[:results:exp35|TRAIL 5ng/ml R00 exp35]]|0.075|| |[[:results:exp356|Docosahexaenoic-acid 50μM R07 exp356]]|0.072|| |[[:results:exp180|Dynasore 10μM R04 exp180]]|0.071|| |[[:results:exp75|MK-1775 0.32μM R02 exp75]]|0.068|| |[[:results:exp460|BML-284 0.09μM R08 exp460]]|0.064|| |[[:results:exp227|Cryptotanshinone 12μM R05 exp227]]|0.063|| |[[:results:exp499|LY2090314 0.003μM R08 exp499]]|0.058|| |[[:results:exp59|UMK57 1μM R01 exp59]]|0.058|| |[[:results:exp512|Olaparib 4μM R08 exp512]]|0.056|| |[[:results:exp440|Aphidicolin 0.4μM R08 exp440]]|0.054|| |[[:results:exp436|Dynasore 7μM R08 exp436]]|0.054|| |[[:results:exp6|Bortezomib 0.005μM R00 exp6]]|0.053|| |[[:results:exp529|Thimerosal 0.85μM R08 exp529]]|0.052|| |[[:results:exp312|2-Methoxyestradiol 0.55 to 1μM on day4 R07 exp312]]|0.062|| {{:chemogenomics:comparison_plots:exp106_vs_exp175.png?nolink |}} {{:chemogenomics:comparison_plots:exp175_vs_exp517.png?nolink |}} {{:chemogenomics:comparison_plots:exp175_vs_exp500.png?nolink |}} {{:chemogenomics:comparison_plots:exp175_vs_exp36.png?nolink |}} {{:chemogenomics:comparison_plots:exp175_vs_exp35.png?nolink |}} {{:chemogenomics:comparison_plots:exp175_vs_exp356.png?nolink |}} {{:chemogenomics:comparison_plots:exp175_vs_exp180.png?nolink |}} {{:chemogenomics:comparison_plots:exp175_vs_exp75.png?nolink |}} {{:chemogenomics:comparison_plots:exp175_vs_exp460.png?nolink |}} {{:chemogenomics:comparison_plots:exp175_vs_exp227.png?nolink |}} {{:chemogenomics:comparison_plots:exp175_vs_exp499.png?nolink |}} {{:chemogenomics:comparison_plots:exp175_vs_exp59.png?nolink |}} {{:chemogenomics:comparison_plots:exp175_vs_exp512.png?nolink |}} {{:chemogenomics:comparison_plots:exp175_vs_exp440.png?nolink |}} {{:chemogenomics:comparison_plots:exp175_vs_exp436.png?nolink |}} {{:chemogenomics:comparison_plots:exp175_vs_exp6.png?nolink |}} {{:chemogenomics:comparison_plots:exp175_vs_exp529.png?nolink |}} {{:chemogenomics:comparison_plots:exp175_vs_exp312.png?nolink |}} ^GO Term^Fold Change^Genes^ |GATOR1 complex|591.93|NPRL2,NPRL3| |Seh1-associated complex|253.68|NPRL2,NPRL3,DEPDC5| |negative regulation of TORC1 signaling|57.75|NPRL2,NPRL3,SZT2,DEPDC5| |cellular response to amino acid starvation|49.33|NPRL2,NPRL3,SZT2,DEPDC5| |response to amino acid starvation|46.43|NPRL2,NPRL3,SZT2,DEPDC5| |negative regulation of TOR signaling|35.87|NPRL2,NPRL3,SZT2,DEPDC5| |regulation of TORC1 signaling|27.53|NPRL2,NPRL3,SZT2,DEPDC5| ^GO Term^Fold Change^Genes^ |GATOR2 complex|276.23|WDR24,MIOS| |CKM complex|276.23|MED13,CCNC| |SAGA complex|138.12|SUPT7L,TAF5L,TADA2B,TADA1,KAT2A,SGF29| |SAGA-type complex|87.23|SUPT7L,TAF5L,TADA2B,TADA1,KAT2A,SGF29| |histone acetylation|57.15|TAF5L,KAT2A,SGF29| |internal peptidyl-lysine acetylation|48.75|TAF5L,KAT2A,SGF29| |histone acetyltransferase complex|42.97|BRPF1,SUPT7L,TAF5L,TADA2B,TADA1,KAT2A,SGF29| |protein acetyltransferase complex|38.67|BRPF1,SUPT7L,TAF5L,TADA2B,TADA1,KAT2A,SGF29| |acetyltransferase complex|38.29|BRPF1,SUPT7L,TAF5L,TADA2B,TADA1,KAT2A,SGF29| |peptidase complex|27.86|SUPT7L,TAF5L,TADA2B,TADA1,KAT2A,SGF29| |regulation of RNA splicing|18.83|SUPT7L,TAF5L,TADA2B,TADA1,KAT2A,SGF29| |regulation of DNA repair|16.41|SUPT7L,TAF5L,TADA2B,TADA1,KAT2A,SGF29| |transferase complex, transferring phosphorus-containing groups|13.71|TAF5L,POLR2J,MED13,KAT2A,CDK2,CCNC,PFKP| |transcription coactivator activity|12.37|SUPT7L,TAF5L,TADA2B,TADA1,MED13,KAT2A| |regulation of DNA metabolic process|9.83|SUPT7L,TAF5L,TADA2B,SLFN11,TADA1,ID3,KAT2A,CDK2,SGF29| |transferase complex|8.67|FBXO11,BRPF1,SUPT7L,TAF5L,TADA2B,POLR2J,TADA1,MED13,KAT2A,CDK2,CCNC,SGF29,PFKP| |transcription coregulator activity|7.94|SUPT7L,TAF5L,TADA2B,MED13L,TADA1,MED13,KAT2A| |intracellular protein-containing complex|6.31|FBXO11,BRPF1,SUPT7L,TAF5L,MLST8,TADA2B,POLR2J,TADA1,KAT2A,SGF29| |post-translational protein modification|5.61|FBXO11,UBA6,BIRC6,TAF5L,WDR24,KAT2A,CDK2,HECTD1,SGF29|