FAM173B [The Human Chemical-Genetic Interaction Map Project]

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======= FAM173B =======


== Gene Information ==
  * **<color #00a2e8>Official Symbol</color>**: ATPSCKMT
  * **<color #00a2e8>Official Name</color>**: ATP synthase c subunit lysine N-methyltransferase
  * **<color #00a2e8>Aliases and Previous Symbols</color>**: N/A
  * **<color #00a2e8>Entrez ID</color>**: [[https://www.ncbi.nlm.nih.gov/gene/?term=134145|134145]]
  * **<color #00a2e8>UniProt</color>**: [[https://www.uniprot.org/uniprot/Q6P4H8|Q6P4H8]]
  * **<color #00a2e8>Interactions</color>**: [[https://thebiogrid.org/search.php?search=FAM173B&organism=9606|BioGRID]]
  * **<color #00a2e8>PubMed articles</color>**: [[https://www.ncbi.nlm.nih.gov/pubmed/?term=gene%20FAM173B|Open PubMed]]
  * **<color #00a2e8>OMIM</color>**: [[https://omim.org/entry/618568|Open OMIM]]

== Function Summary ==
  * **<color #00a2e8>Entrez Summary</color>**: N/A
  * **<color #00a2e8>UniProt Summary</color>**: N/A

<button type='default' size='sm' modal='Pfam_Domains'>Pfam Domains</button>
<button type='primary' size='sm' modal='GO_terms'>GO Terms</button>


<modal id='Pfam_Domains' size='lg' title='Pfam Domains'>
No Pfam Domain information is available for this gene.
</modal>

<modal id='GO_terms' size='lg' title='GO Terms'>
|positive regulation of proton-transporting ATP synthase activity, rotational mechanism|
|regulation of mitochondrial ATP synthesis coupled proton transport|
|regulation of proton-transporting ATP synthase activity, rotational mechanism|
|mitochondrial crista|
|positive regulation of sensory perception of pain|
|regulation of ATP biosynthetic process|
|regulation of proton transport|
|protein-lysine N-methyltransferase activity|
|peptidyl-lysine trimethylation|
|regulation of oxidative phosphorylation|
|regulation of sensory perception of pain|
|regulation of purine nucleotide biosynthetic process|
|regulation of nucleotide biosynthetic process|
|regulation of sensory perception|
|positive regulation of nervous system process|
|peptidyl-lysine methylation|
|positive regulation of ion transmembrane transporter activity|
|positive regulation of transporter activity|
|regulation of purine nucleotide metabolic process|
|regulation of nucleotide metabolic process|
|regulation of ATP metabolic process|
|protein alkylation|
|protein methylation|
|regulation of nervous system process|
|positive regulation of cation transmembrane transport|
|positive regulation of ion transmembrane transport|
|regulation of generation of precursor metabolites and energy|
|positive regulation of transmembrane transport|
|macromolecule methylation|
|regulation of ion transmembrane transporter activity|
|regulation of transmembrane transporter activity|
|positive regulation of ion transport|
|regulation of transporter activity|
|methylation|
|peptidyl-lysine modification|
|regulation of cation transmembrane transport|
|regulation of intracellular transport|
|regulation of small molecule metabolic process|
|regulation of ion transmembrane transport|
|regulation of transmembrane transport|
|regulation of system process|
|regulation of ion transport|
|peptidyl-amino acid modification|
|regulation of cellular localization|
|positive regulation of transport|
|mitochondrion|
|regulation of phosphorylation|
|positive regulation of multicellular organismal process|
|positive regulation of molecular function|
|regulation of phosphate metabolic process|
|regulation of phosphorus metabolic process|
|regulation of transport|
</modal>
\\

 === CRISPR Data ===
<button type='primary' size='small' modal='Compound_Hit'>Compound Hit</button>
<button type='default' size='small' modal='Most_Correlated_Genes'>Most Correlated Genes in Chemogenomics</button>
<button type='primary' size='small' modal='Essential_Avana'>Tissues where Essential in the Avana Dataset (DepMap 20Q1)</button>

<modal id='Compound_Hit' size='lg' title='Compound Hit'>
^Screen^Score^
|[[:results:exp135|MS023 7μM R03 exp135]]|-2.01|
|[[:results:exp507|Monensin 0.3μM R08 exp507]]|1.97|
</modal>

<modal id='Most_Correlated_Genes' size='lg' title='Most Correlated Genes in Chemogenomics'>
No correlation found to any other genes in chemogenomics.
</modal>

<modal id='Essential_Avana' size='lg' title='Tissues where Essential in the Avana Dataset (DepMap 20Q1)'>
Global Fraction of Cell Lines Where Essential: 0/739
^Tissue^Fraction Of Cell Lines Where Essential^
|1290807.0|0/1|
|909776.0|0/1|
|bile duct|0/28|
|blood|0/28|
|bone|0/26|
|breast|0/33|
|central nervous system|0/56|
|cervix|0/4|
|colorectal|0/17|
|esophagus|0/13|
|fibroblast|0/1|
|gastric|0/16|
|kidney|0/21|
|liver|0/20|
|lung|0/75|
|lymphocyte|0/16|
|ovary|0/26|
|pancreas|0/24|
|peripheral nervous system|0/16|
|plasma cell|0/15|
|prostate|0/1|
|skin|0/24|
|soft tissue|0/9|
|thyroid|0/2|
|upper aerodigestive|0/22|
|urinary tract|0/29|
|uterus|0/5|
</modal>

== Essentiality in NALM6  ==
    * **<color #00a2e8>Essentiality Rank</color>**: 10867
    * **<color #00a2e8>Expression level (log2 read counts)</color>**: 4.43 
<button type='primary' size='small' modal='Dist_expr'>Expression Distribution</button>
<modal id='Dist_expr' size='lg' title='FAM173B Expression in NALM6 Cells: 4.43'>
{{:chemogenomics:nalm6 dist.png?nolink |}}
</modal>