HIST1H3A [The Human Chemical-Genetic Interaction Map Project]

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======= HIST1H3A =======


== Gene Information ==
  * **<color #00a2e8>Official Symbol</color>**: H3C1
  * **<color #00a2e8>Official Name</color>**: H3 clustered histone 1
  * **<color #00a2e8>Aliases and Previous Symbols</color>**: N/A
  * **<color #00a2e8>Entrez ID</color>**: [[https://www.ncbi.nlm.nih.gov/gene/?term=8350|8350]]
  * **<color #00a2e8>UniProt</color>**: [[https://www.uniprot.org/uniprot/P68431|P68431]]
  * **<color #00a2e8>Interactions</color>**: [[https://thebiogrid.org/search.php?search=HIST1H3A&organism=9606|BioGRID]]
  * **<color #00a2e8>PubMed articles</color>**: [[https://www.ncbi.nlm.nih.gov/pubmed/?term=gene%20HIST1H3A|Open PubMed]]
  * **<color #00a2e8>OMIM</color>**: [[https://omim.org/entry/602810|Open OMIM]]

== Function Summary ==
  * **<color #00a2e8>Entrez Summary</color>**: N/A
  * **<color #00a2e8>UniProt Summary</color>**: N/A

<button type='primary' size='sm' modal='Pfam_Domains'>Pfam Domains</button>
<button type='primary' size='sm' modal='GO_terms'>GO Terms</button>


<modal id='Pfam_Domains' size='lg' title='Pfam Domains'>
|Histone|
</modal>

<modal id='GO_terms' size='lg' title='GO Terms'>
|DNA replication-dependent nucleosome assembly|
|DNA replication-dependent nucleosome organization|
|chromatin silencing at rDNA|
|nuclear nucleosome|
|interleukin-7-mediated signaling pathway|
|nuclear chromosome|
|response to interleukin-7|
|cellular response to interleukin-7|
|protein heterotetramerization|
|nucleosomal DNA binding|
|regulation of megakaryocyte differentiation|
|chromatin organization involved in negative regulation of transcription|
|chromatin silencing|
|nucleosome|
|chromatin organization involved in regulation of transcription|
|negative regulation of gene expression, epigenetic|
|regulation of gene silencing by miRNA|
|regulation of gene silencing by RNA|
|regulation of posttranscriptional gene silencing|
|telomere organization|
|protein heterooligomerization|
|nucleosome assembly|
|regulation of gene silencing|
|chromatin assembly|
|protein tetramerization|
|gene silencing|
|chromatin assembly or disassembly|
|nucleosome organization|
|DNA packaging|
|protein-DNA complex assembly|
|regulation of myeloid cell differentiation|
|regulation of gene expression, epigenetic|
|protein-DNA complex subunit organization|
|blood coagulation|
|coagulation|
|DNA conformation change|
|hemostasis|
|cadherin binding|
|regulation of hemopoiesis|
|wound healing|
|protein heterodimerization activity|
|regulation of body fluid levels|
|protein complex oligomerization|
|response to wounding|
|protein-containing complex|
|cytokine-mediated signaling pathway|
|chromatin organization|
|cellular protein-containing complex assembly|
|cellular response to cytokine stimulus|
|chromosome organization|
|response to cytokine|
|negative regulation of transcription, DNA-templated|
|negative regulation of nucleic acid-templated transcription|
|negative regulation of RNA biosynthetic process|
|negative regulation of RNA metabolic process|
|negative regulation of cellular macromolecule biosynthetic process|
|negative regulation of nucleobase-containing compound metabolic process|
|negative regulation of macromolecule biosynthetic process|
|negative regulation of cellular biosynthetic process|
|negative regulation of biosynthetic process|
|protein-containing complex assembly|
|regulation of immune system process|
|negative regulation of gene expression|
|regulation of cell differentiation|
|protein-containing complex subunit organization|
|extracellular region|
|membrane|
</modal>
\\

 === CRISPR Data ===
<button type='default' size='small' modal='Compound_Hit'>Compound Hit</button>
<button type='default' size='small' modal='Most_Correlated_Genes'>Most Correlated Genes in Chemogenomics</button>
<button type='primary' size='small' modal='Essential_Avana'>Tissues where Essential in the Avana Dataset (DepMap 20Q1)</button>

<modal id='Compound_Hit' size='lg' title='Compound Hit'>
No hits were found.
</modal>

<modal id='Most_Correlated_Genes' size='lg' title='Most Correlated Genes in Chemogenomics'>
No correlation found to any other genes in chemogenomics.
</modal>

<modal id='Essential_Avana' size='lg' title='Tissues where Essential in the Avana Dataset (DepMap 20Q1)'>
Global Fraction of Cell Lines Where Essential: 2/739
^Tissue^Fraction Of Cell Lines Where Essential^
|1290807.0|0/1|
|909776.0|0/1|
|bile duct|0/28|
|blood|1/28|
|bone|0/26|
|breast|0/33|
|central nervous system|0/56|
|cervix|0/4|
|colorectal|0/17|
|esophagus|0/13|
|fibroblast|0/1|
|gastric|0/16|
|kidney|0/21|
|liver|0/20|
|lung|0/75|
|lymphocyte|0/16|
|ovary|0/26|
|pancreas|0/24|
|peripheral nervous system|0/16|
|plasma cell|0/15|
|prostate|0/1|
|skin|0/24|
|soft tissue|0/9|
|thyroid|0/2|
|upper aerodigestive|0/22|
|urinary tract|0/29|
|uterus|0/5|
</modal>

== Essentiality in NALM6  ==
    * **<color #00a2e8>Essentiality Rank</color>**: 7245
    * **<color #00a2e8>Expression level (log2 read counts)</color>**: -1.17 
<button type='primary' size='small' modal='Dist_expr'>Expression Distribution</button>
<modal id='Dist_expr' size='lg' title='HIST1H3A Expression in NALM6 Cells: -1.17'>
{{:chemogenomics:nalm6 dist.png?nolink |}}
</modal>