NDUFA2 [The Human Chemical-Genetic Interaction Map Project]

This page is read only. You can view the source, but not change it. Ask your administrator if you think this is wrong.
======= NDUFA2 =======


== Gene Information ==
  * **<color #00a2e8>Official Symbol</color>**: NDUFA2
  * **<color #00a2e8>Official Name</color>**: N/ADH:ubiquinone oxidoreductase subunit A2
  * **<color #00a2e8>Aliases and Previous Symbols</color>**: N/A
  * **<color #00a2e8>Entrez ID</color>**: [[https://www.ncbi.nlm.nih.gov/gene/?term=4695|4695]]
  * **<color #00a2e8>UniProt</color>**: [[https://www.uniprot.org/uniprot/O43678|O43678]]
  * **<color #00a2e8>Interactions</color>**: [[https://thebiogrid.org/search.php?search=NDUFA2&organism=9606|BioGRID]]
  * **<color #00a2e8>PubMed articles</color>**: [[https://www.ncbi.nlm.nih.gov/pubmed/?term=gene%20NDUFA2|Open PubMed]]
  * **<color #00a2e8>OMIM</color>**: [[https://omim.org/entry/602137|Open OMIM]]

== Function Summary ==
  * **<color #00a2e8>Entrez Summary</color>**:  The encoded protein is a subunit of the hydrophobic protein fraction of the NADH:ubiquinone oxidoreductase (complex 1), the first enzyme complex in the electron transport chain located in the inner mitochondrial membrane, and may be involved in regulating complex I activity or its assembly via assistance in redox processes. Mutations in this gene are associated with Leigh syndrome, an early-onset progressive neurodegenerative disorder. Alternative splicing results in multiple transcript variants.[provided by RefSeq, May 2010]. 
  * **<color #00a2e8>UniProt Summary</color>**:  Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. {ECO:0000269|PubMed:27626371}.

<button type='primary' size='sm' modal='Pfam_Domains'>Pfam Domains</button>
<button type='primary' size='sm' modal='GO_terms'>GO Terms</button>


<modal id='Pfam_Domains' size='lg' title='Pfam Domains'>
|L51 S25 CI-B8|
</modal>

<modal id='GO_terms' size='lg' title='GO Terms'>
|blastocyst hatching|
|hatching|
|organism emergence from protective structure|
|NADH dehydrogenase (ubiquinone) activity|
|mitochondrial electron transport, NADH to ubiquinone|
|mitochondrial respiratory chain complex I|
|NADH dehydrogenase complex assembly|
|mitochondrial respiratory chain complex I assembly|
|mitochondrial ATP synthesis coupled electron transport|
|ATP synthesis coupled electron transport|
|mitochondrial respiratory chain complex assembly|
|blastocyst development|
|mitochondrial membrane|
|respiratory electron transport chain|
|oxidative phosphorylation|
|cellular respiration|
|electron transport chain|
|ATP metabolic process|
|energy derivation by oxidation of organic compounds|
|in utero embryonic development|
|mitochondrial inner membrane|
|generation of precursor metabolites and energy|
|mitochondrion organization|
|chordate embryonic development|
|embryo development ending in birth or egg hatching|
|cellular protein-containing complex assembly|
|oxidation-reduction process|
|embryo development|
|phosphorylation|
|protein-containing complex assembly|
|protein-containing complex subunit organization|
</modal>
\\

 === CRISPR Data ===
<button type='primary' size='small' modal='Compound_Hit'>Compound Hit</button>
<button type='primary' size='small' modal='Most_Correlated_Genes'>Most Correlated Genes in Chemogenomics</button>
<button type='primary' size='small' modal='Essential_Avana'>Tissues where Essential in the Avana Dataset (DepMap 20Q1)</button>

<modal id='Compound_Hit' size='lg' title='Compound Hit'>
^Screen^Score^
|[[:results:exp455|Benzoate 10000μM R08 exp455]]|-2.02|
|[[:results:exp211|AICAR 240μM R05 exp211]]|1.71|
|[[:results:exp78|Pterostilbene 16μM R02 exp78]]|1.71|
|[[:results:exp380|NMS-873 0.07μM R07 exp380]]|1.73|
|[[:results:exp52|Ribavirin 10μM R01 exp52]]|1.75|
|[[:results:exp73|LJH685 5μM R02 exp73]]|1.77|
|[[:results:exp532|TIC10 10μM R08 exp532]]|1.78|
|[[:results:exp13|Chloramphenicol 20μM R00 exp13]]|1.88|
|[[:results:exp539|42°C R08 exp539]]|1.94|
|[[:results:exp515|PU-H71 1μM R08 exp515]]|1.97|
|[[:results:exp365|I-BRD9 4μM R07 exp365]]|1.98|
|[[:results:exp439|QNZ 0.01μM R08 exp439]]|1.99|
|[[:results:exp84|UM0125461 0.74μM R02 exp84]]|1.99|
|[[:results:exp59|UMK57 1μM R01 exp59]]|2|
|[[:results:exp530|Thioridazine 5μM R08 exp530]]|2.01|
|[[:results:exp513|ONC212 0.15μM R08 exp513]]|2.07|
|[[:results:exp466|Cannabidiol 20μM R08 exp466]]|2.09|
|[[:results:exp470|Chloroquine 32μM R08 exp470]]|2.16|
|[[:results:exp500|LY2090314 0.003μM R08 exp500 no dilution day6]]|2.23|
|[[:results:exp534|Trientine 500μM R08 exp534]]|2.28|
|[[:results:exp360|Genistein 15μM R07 exp360]]|2.41|
|[[:results:exp454|Bafilomycin-A1 0.009μM R08 exp454]]|2.45|
|[[:results:exp48|Mubritinib 0.2μM R01 exp48]]|2.45|
|[[:results:exp342|Calcium Ionophore 0.4μM R07 exp342]]|2.5|
|[[:results:exp434|Vemurafenib 6.6μM R08 exp434]]|2.52|
|[[:results:exp527|Tanespimycin 14μM R08 exp527]]|2.63|
|[[:results:exp448|Ammonium tetrathiomolybdate 10μM R08 exp448]]|2.69|
|[[:results:exp416|Tubacin 1.6μM R07 exp416]]|2.75|
|[[:results:exp329|Hydroxyurea 100μM R07 exp329]]|2.82|
|[[:results:exp450|Artemisinin 50μM R08 exp450]]|2.89|
|[[:results:exp492|iCRT14 30μM R08 exp492]]|2.97|
|[[:results:exp160|Ribavirin 10 to 15μM on day4 R04 exp160]]|3.02|
|[[:results:exp507|Monensin 0.3μM R08 exp507]]|3.06|
|[[:results:exp451|Atovaquone 15μM R08 exp451]]|3.13|
|[[:results:exp288|HMS-I2 10μM R06 exp288]]|3.76|
|[[:results:exp25|Oligomycin-A 2μM R00 exp25]]|4.5|
</modal>

<modal id='Most_Correlated_Genes' size='lg' title='Most Correlated Genes in Chemogenomics'>
^Gene^Correlation^
|[[:human genes:n:ndufaf7|NDUFAF7]]|0.729|
|[[:human genes:n:ndufa3|NDUFA3]]|0.721|
|[[:human genes:n:ndufb11|NDUFB11]]|0.72|
|[[:human genes:n:ndufs2|NDUFS2]]|0.71|
|[[:human genes:n:ndufaf3|NDUFAF3]]|0.686|
|[[:human genes:n:ndufa11|NDUFA11]]|0.68|
|[[:human genes:n:ndufb9|NDUFB9]]|0.677|
|[[:human genes:n:ndufa1|NDUFA1]]|0.665|
|[[:human genes:n:ndufc2|NDUFC2]]|0.659|
|[[:human genes:g:grsf1|GRSF1]]|0.649|
|[[:human genes:m:mto1|MTO1]]|0.643|
|[[:human genes:n:ndufaf6|NDUFAF6]]|0.629|
|[[:human genes:n:ndufs7|NDUFS7]]|0.628|
|[[:human genes:a:acad9|ACAD9]]|0.627|
|[[:human genes:n:ndufa6|NDUFA6]]|0.622|
|[[:human genes:n:nubpl|NUBPL]]|0.62|
|[[:human genes:e:ecsit|ECSIT]]|0.619|
|[[:human genes:n:ndufa8|NDUFA8]]|0.617|
|[[:human genes:m:mtrf1l|MTRF1L]]|0.616|
|[[:human genes:n:ndufc1|NDUFC1]]|0.612|
|[[:human genes:n:ndufb2|NDUFB2]]|0.598|
|[[:human genes:g:gtpbp10|GTPBP10]]|0.594|
|[[:human genes:n:ndufb7|NDUFB7]]|0.593|
|[[:human genes:n:ndufb5|NDUFB5]]|0.593|
|[[:human genes:p:pet117|PET117]]|0.59|
|[[:human genes:n:ndufv1|NDUFV1]]|0.586|
|[[:human genes:n:ndufb6|NDUFB6]]|0.585|
|[[:human genes:n:ndufaf4|NDUFAF4]]|0.579|
|[[:human genes:q:qrsl1|QRSL1]]|0.577|
|[[:human genes:n:ndufs8|NDUFS8]]|0.576|
|[[:human genes:t:timmdc1|TIMMDC1]]|0.575|
|[[:human genes:c:chchd1|CHCHD1]]|0.575|
|[[:human genes:h:hsd17b10|HSD17B10]]|0.574|
|[[:human genes:n:ndufa10|NDUFA10]]|0.574|
|[[:human genes:n:ndufs5|NDUFS5]]|0.572|
|[[:human genes:m:mettl17|METTL17]]|0.569|
|[[:human genes:n:ndufa13|NDUFA13]]|0.567|
|[[:human genes:r:rtn4ip1|RTN4IP1]]|0.567|
|[[:human genes:g:gfm2|GFM2]]|0.559|
|[[:human genes:m:mrps21|MRPS21]]|0.559|
|[[:human genes:s:selrc1|SELRC1]]|0.558|
|[[:human genes:f:foxred1|FOXRED1]]|0.557|
|[[:human genes:c:c12orf65|C12orf65]]|0.552|
|[[:human genes:l:lars2|LARS2]]|0.552|
|[[:human genes:p:pet112|PET112]]|0.549|
|[[:human genes:f:fastkd2|FASTKD2]]|0.548|
|[[:human genes:m:mrpl21|MRPL21]]|0.547|
|[[:human genes:c:coq7|COQ7]]|0.547|
|[[:human genes:r:rpusd3|RPUSD3]]|0.545|
|[[:human genes:n:ndufv2|NDUFV2]]|0.544|
|[[:human genes:t:tmem261|TMEM261]]|0.542|
|[[:human genes:p:polg2|POLG2]]|0.541|
|[[:human genes:c:c17orf89|C17orf89]]|0.54|
|[[:human genes:c:coq2|COQ2]]|0.538|
|[[:human genes:m:mrps25|MRPS25]]|0.537|
|[[:human genes:m:mrpl47|MRPL47]]|0.536|
|[[:human genes:p:polg|POLG]]|0.534|
|[[:human genes:m:mrps34|MRPS34]]|0.531|
|[[:human genes:n:ndufaf1|NDUFAF1]]|0.531|
|[[:human genes:g:gfm1|GFM1]]|0.53|
|[[:human genes:n:ndufs3|NDUFS3]]|0.53|
|[[:human genes:f:ftsj2|FTSJ2]]|0.528|
|[[:human genes:m:mrpl15|MRPL15]]|0.528|
|[[:human genes:t:tars2|TARS2]]|0.527|
|[[:human genes:s:sco2|SCO2]]|0.527|
|[[:human genes:n:nars2|NARS2]]|0.527|
|[[:human genes:y:yars2|YARS2]]|0.526|
|[[:human genes:n:ndufb4|NDUFB4]]|0.524|
|[[:human genes:m:mtg1|MTG1]]|0.523|
|[[:human genes:e:ears2|EARS2]]|0.523|
|[[:human genes:n:ndufb10|NDUFB10]]|0.519|
|[[:human genes:a:atp5sl|ATP5SL]]|0.518|
|[[:human genes:m:mrpl45|MRPL45]]|0.515|
|[[:human genes:t:tufm|TUFM]]|0.514|
|[[:human genes:r:rpusd4|RPUSD4]]|0.511|
|[[:human genes:m:mrps16|MRPS16]]|0.51|
|[[:human genes:m:mrps5|MRPS5]]|0.509|
|[[:human genes:p:pars2|PARS2]]|0.508|
|[[:human genes:g:gtpbp8|GTPBP8]]|0.505|
|[[:human genes:m:mrpl53|MRPL53]]|0.505|
|[[:human genes:m:mrps33|MRPS33]]|0.502|
|[[:human genes:m:mtg2|MTG2]]|0.499|
|[[:human genes:m:mrps6|MRPS6]]|0.498|
|[[:human genes:t:tefm|TEFM]]|0.498|
|[[:human genes:c:c10orf2|C10orf2]]|0.496|
|[[:human genes:n:ndufs1|NDUFS1]]|0.495|
|[[:human genes:c:coa3|COA3]]|0.493|
|[[:human genes:w:wbscr16|WBSCR16]]|0.492|
|[[:human genes:n:ndufaf5|NDUFAF5]]|0.489|
|[[:human genes:m:mrpl13|MRPL13]]|0.487|
|[[:human genes:d:dars2|DARS2]]|0.485|
|[[:human genes:r:rnaseh1|RNASEH1]]|0.484|
|[[:human genes:r:rbfa|RBFA]]|0.484|
|[[:human genes:m:mcat|MCAT]]|0.483|
|[[:human genes:c:cars2|CARS2]]|0.482|
|[[:human genes:c:clpp|CLPP]]|0.482|
|[[:human genes:d:dap3|DAP3]]|0.482|
|[[:human genes:m:mrps14|MRPS14]]|0.482|
|[[:human genes:n:ndufa5|NDUFA5]]|0.481|
|[[:human genes:m:mtif2|MTIF2]]|0.481|
|[[:human genes:c:c1qbp|C1QBP]]|0.48|
|[[:human genes:i:iba57|IBA57]]|0.479|
|[[:human genes:b:bcs1l|BCS1L]]|0.476|
|[[:human genes:m:mrpl23|MRPL23]]|0.475|
|[[:human genes:g:gatc|GATC]]|0.474|
|[[:human genes:n:ndufb3|NDUFB3]]|0.474|
|[[:human genes:m:mrpl55|MRPL55]]|0.472|
|[[:human genes:m:mrp63|MRP63]]|0.472|
|[[:human genes:f:fastkd5|FASTKD5]]|0.471|
|[[:human genes:m:mrpl43|MRPL43]]|0.471|
|[[:human genes:s:sars2|SARS2]]|0.47|
|[[:human genes:c:cox16|COX16]]|0.47|
|[[:human genes:m:mterfd1|MTERFD1]]|0.47|
|[[:human genes:r:rnmtl1|RNMTL1]]|0.469|
|[[:human genes:m:mars2|MARS2]]|0.468|
|[[:human genes:c:coq4|COQ4]]|0.467|
|[[:human genes:d:ddx28|DDX28]]|0.466|
|[[:human genes:a:atp5c1|ATP5C1]]|0.466|
|[[:human genes:t:tfb1m|TFB1M]]|0.466|
|[[:human genes:c:coa6|COA6]]|0.465|
|[[:human genes:m:mrpl22|MRPL22]]|0.465|
|[[:human genes:v:vars2|VARS2]]|0.464|
|[[:human genes:m:mrpl44|MRPL44]]|0.463|
|[[:human genes:a:aars2|AARS2]]|0.463|
|[[:human genes:n:ndufa9|NDUFA9]]|0.46|
|[[:human genes:a:ak3|AK3]]|0.459|
|[[:human genes:r:rars2|RARS2]]|0.459|
|[[:human genes:m:mrpl12|MRPL12]]|0.457|
|[[:human genes:m:mrpl3|MRPL3]]|0.457|
|[[:human genes:h:hmgxb3|HMGXB3]]|0.456|
|[[:human genes:m:mrpl1|MRPL1]]|0.456|
|[[:human genes:p:polrmt|POLRMT]]|0.456|
|[[:human genes:m:malsu1|MALSU1]]|0.455|
|[[:human genes:m:mrps12|MRPS12]]|0.455|
|[[:human genes:m:mrps24|MRPS24]]|0.455|
|[[:human genes:t:tmem126b|TMEM126B]]|0.454|
|[[:human genes:m:mrps18a|MRPS18A]]|0.453|
|[[:human genes:n:ndufb8|NDUFB8]]|0.453|
|[[:human genes:m:mrpl17|MRPL17]]|0.452|
|[[:human genes:f:fars2|FARS2]]|0.451|
|[[:human genes:m:mrps23|MRPS23]]|0.45|
|[[:human genes:t:tomm6|TOMM6]]|0.45|
|[[:human genes:a:aifm1|AIFM1]]|0.448|
|[[:human genes:s:slc25a3|SLC25A3]]|0.448|
|[[:human genes:m:mrps26|MRPS26]]|0.447|
|[[:human genes:a:atp5d|ATP5D]]|0.447|
|[[:human genes:m:mrps27|MRPS27]]|0.447|
|[[:human genes:r:rmnd1|RMND1]]|0.446|
|[[:human genes:w:wars2|WARS2]]|0.445|
|[[:human genes:u:uqcrc1|UQCRC1]]|0.445|
|[[:human genes:s:ssbp1|SSBP1]]|0.444|
|[[:human genes:m:mipep|MIPEP]]|0.442|
|[[:human genes:g:glrx5|GLRX5]]|0.441|
|[[:human genes:c:cox6c|COX6C]]|0.441|
|[[:human genes:n:nfu1|NFU1]]|0.441|
|[[:human genes:p:pdss1|PDSS1]]|0.441|
|[[:human genes:m:mrpl11|MRPL11]]|0.438|
|[[:human genes:s:slc25a52|SLC25A52]]|0.437|
|[[:human genes:m:mtif3|MTIF3]]|0.436|
|[[:human genes:s:slc25a51|SLC25A51]]|0.435|
|[[:human genes:p:pnpt1|PNPT1]]|0.434|
|[[:human genes:s:supv3l1|SUPV3L1]]|0.432|
|[[:human genes:m:mterfd2|MTERFD2]]|0.432|
|[[:human genes:t:tomm20|TOMM20]]|0.431|
|[[:human genes:m:mrpl41|MRPL41]]|0.431|
|[[:human genes:k:kiaa0391|KIAA0391]]|0.43|
|[[:human genes:m:mrps11|MRPS11]]|0.429|
|[[:human genes:m:mrps9|MRPS9]]|0.427|
|[[:human genes:h:hars2|HARS2]]|0.426|
|[[:human genes:a:alas1|ALAS1]]|0.426|
|[[:human genes:n:noa1|NOA1]]|0.425|
|[[:human genes:c:cox15|COX15]]|0.424|
|[[:human genes:c:cox7b|COX7B]]|0.42|
|[[:human genes:m:mrps22|MRPS22]]|0.42|
|[[:human genes:m:mrps35|MRPS35]]|0.418|
|[[:human genes:g:gtpbp6|GTPBP6]]|0.415|
|[[:human genes:e:eral1|ERAL1]]|0.413|
|[[:human genes:m:mrps10|MRPS10]]|0.412|
|[[:human genes:s:slc25a26|SLC25A26]]|0.412|
|[[:human genes:a:atp5e|ATP5E]]|0.412|
|[[:human genes:f:fastkd1|FASTKD1]]|0.411|
|[[:human genes:t:trub2|TRUB2]]|0.411|
|[[:human genes:m:mrpl4|MRPL4]]|0.411|
|[[:human genes:m:mrps2|MRPS2]]|0.409|
|[[:human genes:m:minos1|MINOS1]]|0.409|
|[[:human genes:p:ptcd3|PTCD3]]|0.408|
|[[:human genes:g:got2|GOT2]]|0.406|
|[[:human genes:m:mrps18b|MRPS18B]]|0.404|
|[[:human genes:c:cox11|COX11]]|0.403|
</modal>

<modal id='Essential_Avana' size='lg' title='Tissues where Essential in the Avana Dataset (DepMap 20Q1)'>
Global Fraction of Cell Lines Where Essential: 44/739
^Tissue^Fraction Of Cell Lines Where Essential^
|1290807.0|0/1|
|909776.0|0/1|
|bile duct|0/28|
|blood|0/28|
|bone|2/26|
|breast|5/33|
|central nervous system|2/56|
|cervix|1/4|
|colorectal|2/17|
|esophagus|0/13|
|fibroblast|0/1|
|gastric|2/16|
|kidney|1/21|
|liver|0/20|
|lung|7/75|
|lymphocyte|0/16|
|ovary|1/26|
|pancreas|0/24|
|peripheral nervous system|1/16|
|plasma cell|2/15|
|prostate|0/1|
|skin|2/24|
|soft tissue|0/9|
|thyroid|0/2|
|upper aerodigestive|2/22|
|urinary tract|1/29|
|uterus|0/5|
</modal>

== Essentiality in NALM6  ==
    * **<color #00a2e8>Essentiality Rank</color>**: 805
    * **<color #00a2e8>Expression level (log2 read counts)</color>**: 5.14 
<button type='primary' size='small' modal='Dist_expr'>Expression Distribution</button>
<modal id='Dist_expr' size='lg' title='NDUFA2 Expression in NALM6 Cells: 5.14'>
{{:chemogenomics:nalm6 dist.png?nolink |}}
</modal>