R3HCC1 [The Human Chemical-Genetic Interaction Map Project]

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======= R3HCC1 =======


== Gene Information ==
  * **<color #00a2e8>Official Symbol</color>**: R3HCC1
  * **<color #00a2e8>Official Name</color>**: R3H domain and coiled-coil containing 1
  * **<color #00a2e8>Aliases and Previous Symbols</color>**: N/A
  * **<color #00a2e8>Entrez ID</color>**: [[https://www.ncbi.nlm.nih.gov/gene/?term=203069|203069]]
  * **<color #00a2e8>UniProt</color>**: [[https://www.uniprot.org/uniprot/Q9Y3T6|Q9Y3T6]]
  * **<color #00a2e8>Interactions</color>**: [[https://thebiogrid.org/search.php?search=R3HCC1&organism=9606|BioGRID]]
  * **<color #00a2e8>PubMed articles</color>**: [[https://www.ncbi.nlm.nih.gov/pubmed/?term=gene%20R3HCC1|Open PubMed]]
  * **<color #00a2e8>OMIM</color>**:  N/A

== Function Summary ==
  * **<color #00a2e8>Entrez Summary</color>**: N/A
  * **<color #00a2e8>UniProt Summary</color>**: N/A

<button type='primary' size='sm' modal='Pfam_Domains'>Pfam Domains</button>
<button type='primary' size='sm' modal='GO_terms'>GO Terms</button>


<modal id='Pfam_Domains' size='lg' title='Pfam Domains'>
|R3H|
</modal>

<modal id='GO_terms' size='lg' title='GO Terms'>
|exon-exon junction complex|
|nucleic acid binding|
</modal>
\\

 === CRISPR Data ===
<button type='primary' size='small' modal='Compound_Hit'>Compound Hit</button>
<button type='default' size='small' modal='Most_Correlated_Genes'>Most Correlated Genes in Chemogenomics</button>
<button type='primary' size='small' modal='Essential_Avana'>Tissues where Essential in the Avana Dataset (DepMap 20Q1)</button>

<modal id='Compound_Hit' size='lg' title='Compound Hit'>
^Screen^Score^
|[[:results:exp476|Dihydrosphingosine 8μM R08 exp476]]|-2.27|
|[[:results:exp77|Prochlorperazine 5.2μM R02 exp77]]|-2.06|
|[[:results:exp185|L-BMAA 500 to 750μM on day4 R04 exp185]]|-1.98|
|[[:results:exp123|GSK-LSD1 10μM R03 exp123]]|-1.97|
|[[:results:exp487|Hinokiflavone 12μM R08 exp487]]|-1.86|
|[[:results:exp5|Alpha-Amanitin 0.5μM R00 exp5]]|-1.83|
|[[:results:exp497|Lead acetate 2000μM R08 exp497]]|-1.79|
|[[:results:exp519|RS-1 10μM R08 exp519]]|-1.71|
|[[:results:exp318|ABT-702 5μM R07 exp318]]|1.7|
|[[:results:exp349|Cytochalasin-B 5μM R07 exp349]]|1.72|
|[[:results:exp47|Lapatinib 5μM R01 exp47]]|1.74|
|[[:results:exp54|Taxol 0.002μM R01 exp54]]|1.76|
|[[:results:exp59|UMK57 1μM R01 exp59]]|1.83|
</modal>

<modal id='Most_Correlated_Genes' size='lg' title='Most Correlated Genes in Chemogenomics'>
No correlation found to any other genes in chemogenomics.
</modal>

<modal id='Essential_Avana' size='lg' title='Tissues where Essential in the Avana Dataset (DepMap 20Q1)'>
Global Fraction of Cell Lines Where Essential: 0/739
^Tissue^Fraction Of Cell Lines Where Essential^
|1290807.0|0/1|
|909776.0|0/1|
|bile duct|0/28|
|blood|0/28|
|bone|0/26|
|breast|0/33|
|central nervous system|0/56|
|cervix|0/4|
|colorectal|0/17|
|esophagus|0/13|
|fibroblast|0/1|
|gastric|0/16|
|kidney|0/21|
|liver|0/20|
|lung|0/75|
|lymphocyte|0/16|
|ovary|0/26|
|pancreas|0/24|
|peripheral nervous system|0/16|
|plasma cell|0/15|
|prostate|0/1|
|skin|0/24|
|soft tissue|0/9|
|thyroid|0/2|
|upper aerodigestive|0/22|
|urinary tract|0/29|
|uterus|0/5|
</modal>

== Essentiality in NALM6  ==
    * **<color #00a2e8>Essentiality Rank</color>**: 6489
    * **<color #00a2e8>Expression level (log2 read counts)</color>**: 4.27 
<button type='primary' size='small' modal='Dist_expr'>Expression Distribution</button>
<modal id='Dist_expr' size='lg' title='R3HCC1 Expression in NALM6 Cells: 4.27'>
{{:chemogenomics:nalm6 dist.png?nolink |}}
</modal>