CALY [The Human Chemical-Genetic Interaction Map Project]

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======= CALY =======


== Gene Information ==
  * **<color #00a2e8>Official Symbol</color>**: CALY
  * **<color #00a2e8>Official Name</color>**: calcyon neuron specific vesicular protein
  * **<color #00a2e8>Aliases and Previous Symbols</color>**: N/A
  * **<color #00a2e8>Entrez ID</color>**: [[https://www.ncbi.nlm.nih.gov/gene/?term=50632|50632]]
  * **<color #00a2e8>UniProt</color>**: [[https://www.uniprot.org/uniprot/Q9NYX4|Q9NYX4]]
  * **<color #00a2e8>Interactions</color>**: [[https://thebiogrid.org/search.php?search=CALY&organism=9606|BioGRID]]
  * **<color #00a2e8>PubMed articles</color>**: [[https://www.ncbi.nlm.nih.gov/pubmed/?term=gene%20CALY|Open PubMed]]
  * **<color #00a2e8>OMIM</color>**: [[https://omim.org/entry/604647|Open OMIM]]

== Function Summary ==
  * **<color #00a2e8>Entrez Summary</color>**: N/A
  * **<color #00a2e8>UniProt Summary</color>**:  Interacts with clathrin light chain A and stimulates clathrin self-assembly and clathrin-mediated endocytosis. {ECO:0000269|PubMed:16595675}.

<button type='primary' size='sm' modal='Pfam_Domains'>Pfam Domains</button>
<button type='primary' size='sm' modal='GO_terms'>GO Terms</button>


<modal id='Pfam_Domains' size='lg' title='Pfam Domains'>
|Calcyon|
</modal>

<modal id='GO_terms' size='lg' title='GO Terms'>
|postsynaptic endocytic zone|
|postsynaptic endocytosis|
|postsynaptic neurotransmitter receptor internalization|
|clathrin light chain binding|
|neurotransmitter receptor internalization|
|clathrin coat assembly|
|neurotransmitter receptor transport|
|dopamine receptor signaling pathway|
|regulation of postsynaptic membrane neurotransmitter receptor levels|
|receptor internalization|
|cellular response to dopamine|
|response to dopamine|
|signal transduction involved in cellular response to ammonium ion|
|positive regulation of endocytosis|
|cellular response to catecholamine stimulus|
|cellular response to monoamine stimulus|
|receptor metabolic process|
|response to catecholamine|
|response to monoamine|
|vesicle-mediated transport in synapse|
|cellular response to ammonium ion|
|cytoplasmic vesicle membrane|
|response to ammonium ion|
|regulation of endocytosis|
|endosomal transport|
|receptor-mediated endocytosis|
|cytoplasmic vesicle|
|protein-containing complex localization|
|protein-containing complex binding|
|endosome|
|glutamatergic synapse|
|cellular response to drug|
|establishment of protein localization to organelle|
|cellular response to organic cyclic compound|
|regulation of vesicle-mediated transport|
|endocytosis|
|cellular response to organonitrogen compound|
|cellular response to nitrogen compound|
|import into cell|
|protein localization to organelle|
|cellular protein-containing complex assembly|
|response to organic cyclic compound|
|positive regulation of transport|
|response to organonitrogen compound|
|response to drug|
|cellular response to oxygen-containing compound|
|response to nitrogen compound|
|positive regulation of cellular component organization|
|cellular response to endogenous stimulus|
|integral component of plasma membrane|
|response to endogenous stimulus|
|protein transport|
|intracellular transport|
|peptide transport|
|response to oxygen-containing compound|
|protein-containing complex assembly|
|amide transport|
|cellular protein localization|
|cellular macromolecule localization|
|establishment of protein localization|
|establishment of localization in cell|
|nitrogen compound transport|
|protein-containing complex subunit organization|
|regulation of transport|
|vesicle-mediated transport|
</modal>
\\

 === CRISPR Data ===
<button type='default' size='small' modal='Compound_Hit'>Compound Hit</button>
<button type='default' size='small' modal='Most_Correlated_Genes'>Most Correlated Genes in Chemogenomics</button>
<button type='primary' size='small' modal='Essential_Avana'>Tissues where Essential in the Avana Dataset (DepMap 20Q1)</button>

<modal id='Compound_Hit' size='lg' title='Compound Hit'>
No hits were found.
</modal>

<modal id='Most_Correlated_Genes' size='lg' title='Most Correlated Genes in Chemogenomics'>
No correlation found to any other genes in chemogenomics.
</modal>

<modal id='Essential_Avana' size='lg' title='Tissues where Essential in the Avana Dataset (DepMap 20Q1)'>
Global Fraction of Cell Lines Where Essential: 0/739
^Tissue^Fraction Of Cell Lines Where Essential^
|1290807.0|0/1|
|909776.0|0/1|
|bile duct|0/28|
|blood|0/28|
|bone|0/26|
|breast|0/33|
|central nervous system|0/56|
|cervix|0/4|
|colorectal|0/17|
|esophagus|0/13|
|fibroblast|0/1|
|gastric|0/16|
|kidney|0/21|
|liver|0/20|
|lung|0/75|
|lymphocyte|0/16|
|ovary|0/26|
|pancreas|0/24|
|peripheral nervous system|0/16|
|plasma cell|0/15|
|prostate|0/1|
|skin|0/24|
|soft tissue|0/9|
|thyroid|0/2|
|upper aerodigestive|0/22|
|urinary tract|0/29|
|uterus|0/5|
</modal>

== Essentiality in NALM6  ==
    * **<color #00a2e8>Essentiality Rank</color>**: 13588
    * **<color #00a2e8>Expression level (log2 read counts)</color>**: -5.6 
<button type='primary' size='small' modal='Dist_expr'>Expression Distribution</button>
<modal id='Dist_expr' size='lg' title='CALY Expression in NALM6 Cells: -5.6'>
{{:chemogenomics:nalm6 dist.png?nolink |}}
</modal>