SEMG2 [The Human Chemical-Genetic Interaction Map Project]

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======= SEMG2 =======


== Gene Information ==
  * **<color #00a2e8>Official Symbol</color>**: SEMG2
  * **<color #00a2e8>Official Name</color>**: semenogelin 2
  * **<color #00a2e8>Aliases and Previous Symbols</color>**: N/A
  * **<color #00a2e8>Entrez ID</color>**: [[https://www.ncbi.nlm.nih.gov/gene/?term=6407|6407]]
  * **<color #00a2e8>UniProt</color>**: [[https://www.uniprot.org/uniprot/Q02383|Q02383]]
  * **<color #00a2e8>Interactions</color>**: [[https://thebiogrid.org/search.php?search=SEMG2&organism=9606|BioGRID]]
  * **<color #00a2e8>PubMed articles</color>**: [[https://www.ncbi.nlm.nih.gov/pubmed/?term=gene%20SEMG2|Open PubMed]]
  * **<color #00a2e8>OMIM</color>**: [[https://omim.org/entry/182141|Open OMIM]]

== Function Summary ==
  * **<color #00a2e8>Entrez Summary</color>**: N/A
  * **<color #00a2e8>UniProt Summary</color>**:  Participates in the formation of a gel matrix (sperm coagulum) entrapping the accessory gland secretions and ejaculated spermatozoa.

<button type='primary' size='sm' modal='Pfam_Domains'>Pfam Domains</button>
<button type='primary' size='sm' modal='GO_terms'>GO Terms</button>


<modal id='Pfam_Domains' size='lg' title='Pfam Domains'>
|Semenogelin|
</modal>

<modal id='GO_terms' size='lg' title='GO Terms'>
|positive regulation of serine-type peptidase activity|
|positive regulation of serine-type endopeptidase activity|
|negative regulation of cilium-dependent cell motility|
|negative regulation of flagellated sperm motility|
|regulation of serine-type peptidase activity|
|regulation of serine-type endopeptidase activity|
|regulation of flagellated sperm motility|
|regulation of cilium-dependent cell motility|
|sperm capacitation|
|antibacterial humoral response|
|negative regulation of reproductive process|
|protease binding|
|protein heterooligomerization|
|antimicrobial humoral response|
|spermatid development|
|spermatid differentiation|
|cell maturation|
|regulation of reproductive process|
|positive regulation of endopeptidase activity|
|positive regulation of peptidase activity|
|developmental maturation|
|germ cell development|
|negative regulation of cell motility|
|coagulation|
|negative regulation of cellular component movement|
|negative regulation of locomotion|
|defense response to bacterium|
|humoral immune response|
|cellular process involved in reproduction in multicellular organism|
|positive regulation of proteolysis|
|regulation of endopeptidase activity|
|regulation of peptidase activity|
|protein complex oligomerization|
|spermatogenesis|
|male gamete generation|
|developmental process involved in reproduction|
|response to bacterium|
|gamete generation|
|regulation of proteolysis|
|positive regulation of hydrolase activity|
|multicellular organismal reproductive process|
|sexual reproduction|
|zinc ion binding|
|multicellular organism reproduction|
|regulation of cell motility|
|defense response to other organism|
|regulation of locomotion|
|regulation of cellular component movement|
|multi-organism reproductive process|
|regulation of hydrolase activity|
|response to other organism|
|response to external biotic stimulus|
|response to biotic stimulus|
|defense response|
|reproductive process|
|reproduction|
|positive regulation of catalytic activity|
|protein-containing complex assembly|
|extracellular space|
|positive regulation of cellular protein metabolic process|
|cell development|
|positive regulation of protein metabolic process|
|positive regulation of molecular function|
|protein-containing complex subunit organization|
|immune response|
</modal>
\\

 === CRISPR Data ===
<button type='primary' size='small' modal='Compound_Hit'>Compound Hit</button>
<button type='default' size='small' modal='Most_Correlated_Genes'>Most Correlated Genes in Chemogenomics</button>
<button type='primary' size='small' modal='Essential_Avana'>Tissues where Essential in the Avana Dataset (DepMap 20Q1)</button>

<modal id='Compound_Hit' size='lg' title='Compound Hit'>
^Screen^Score^
|[[:results:exp515|PU-H71 1μM R08 exp515]]|-1.7|
|[[:results:exp212|Phenformin 20μM R05 exp212]]|1.7|
|[[:results:exp412|THZ531 0.11 to 0.125 to 0.35μM on day4 then day6 R07 exp412]]|1.88|
|[[:results:exp409|THZ531 0.11μM R07 exp409]]|2.27|
</modal>

<modal id='Most_Correlated_Genes' size='lg' title='Most Correlated Genes in Chemogenomics'>
No correlation found to any other genes in chemogenomics.
</modal>

<modal id='Essential_Avana' size='lg' title='Tissues where Essential in the Avana Dataset (DepMap 20Q1)'>
Global Fraction of Cell Lines Where Essential: 0/739
^Tissue^Fraction Of Cell Lines Where Essential^
|1290807.0|0/1|
|909776.0|0/1|
|bile duct|0/28|
|blood|0/28|
|bone|0/26|
|breast|0/33|
|central nervous system|0/56|
|cervix|0/4|
|colorectal|0/17|
|esophagus|0/13|
|fibroblast|0/1|
|gastric|0/16|
|kidney|0/21|
|liver|0/20|
|lung|0/75|
|lymphocyte|0/16|
|ovary|0/26|
|pancreas|0/24|
|peripheral nervous system|0/16|
|plasma cell|0/15|
|prostate|0/1|
|skin|0/24|
|soft tissue|0/9|
|thyroid|0/2|
|upper aerodigestive|0/22|
|urinary tract|0/29|
|uterus|0/5|
</modal>

== Essentiality in NALM6  ==
    * **<color #00a2e8>Essentiality Rank</color>**: 15108
    * **<color #00a2e8>Expression level (log2 read counts)</color>**: -7.68 
<button type='primary' size='small' modal='Dist_expr'>Expression Distribution</button>
<modal id='Dist_expr' size='lg' title='SEMG2 Expression in NALM6 Cells: -7.68'>
{{:chemogenomics:nalm6 dist.png?nolink |}}
</modal>