BHMT [The Human Chemical-Genetic Interaction Map Project]

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======= BHMT =======


== Gene Information ==
  * **<color #00a2e8>Official Symbol</color>**: BHMT
  * **<color #00a2e8>Official Name</color>**: betaine--homocysteine S-methyltransferase
  * **<color #00a2e8>Aliases and Previous Symbols</color>**: N/A
  * **<color #00a2e8>Entrez ID</color>**: [[https://www.ncbi.nlm.nih.gov/gene/?term=635|635]]
  * **<color #00a2e8>UniProt</color>**: [[https://www.uniprot.org/uniprot/Q93088|Q93088]]
  * **<color #00a2e8>Interactions</color>**: [[https://thebiogrid.org/search.php?search=BHMT&organism=9606|BioGRID]]
  * **<color #00a2e8>PubMed articles</color>**: [[https://www.ncbi.nlm.nih.gov/pubmed/?term=gene%20BHMT|Open PubMed]]
  * **<color #00a2e8>OMIM</color>**: [[https://omim.org/entry/602888|Open OMIM]]

== Function Summary ==
  * **<color #00a2e8>Entrez Summary</color>**:  This gene encodes a cytosolic enzyme that catalyzes the conversion of betaine and homocysteine to dimethylglycine and methionine, respectively. Defects in this gene could lead to hyperhomocyst(e)inemia, but such a defect has not yet been observed. [provided by RefSeq, Jul 2008]. 
  * **<color #00a2e8>UniProt Summary</color>**:  Involved in the regulation of homocysteine metabolism. Converts betaine and homocysteine to dimethylglycine and methionine, respectively. This reaction is also required for the irreversible oxidation of choline.

<button type='primary' size='sm' modal='Pfam_Domains'>Pfam Domains</button>
<button type='primary' size='sm' modal='GO_terms'>GO Terms</button>


<modal id='Pfam_Domains' size='lg' title='Pfam Domains'>
|S-methyl trans|
</modal>

<modal id='GO_terms' size='lg' title='GO Terms'>
|regulation of homocysteine metabolic process|
|betaine-homocysteine S-methyltransferase activity|
|regulation of sulfur amino acid metabolic process|
|amino-acid betaine catabolic process|
|choline catabolic process|
|L-methionine biosynthetic process|
|L-methionine salvage|
|amino acid salvage|
|choline metabolic process|
|methionine biosynthetic process|
|regulation of sulfur metabolic process|
|methionine metabolic process|
|amino-acid betaine metabolic process|
|S-adenosylmethionine metabolic process|
|sulfur amino acid biosynthetic process|
|cellular biogenic amine catabolic process|
|amine catabolic process|
|neurotransmitter catabolic process|
|aspartate family amino acid biosynthetic process|
|cellular modified amino acid catabolic process|
|cellular metabolic compound salvage|
|sulfur amino acid metabolic process|
|aspartate family amino acid metabolic process|
|cellular biogenic amine metabolic process|
|cellular amine metabolic process|
|regulation of cellular amino acid metabolic process|
|alpha-amino acid biosynthetic process|
|amine metabolic process|
|regulation of cellular amine metabolic process|
|cellular amino acid biosynthetic process|
|neurotransmitter metabolic process|
|protein alkylation|
|protein methylation|
|regulation of cellular ketone metabolic process|
|sulfur compound biosynthetic process|
|ammonium ion metabolic process|
|cellular modified amino acid metabolic process|
|alpha-amino acid metabolic process|
|coenzyme metabolic process|
|macromolecule methylation|
|carboxylic acid biosynthetic process|
|organic acid biosynthetic process|
|cellular amino acid metabolic process|
|methylation|
|regulation of neurotransmitter levels|
|sulfur compound metabolic process|
|regulation of small molecule metabolic process|
|cellular nitrogen compound catabolic process|
|cofactor metabolic process|
|drug metabolic process|
|small molecule biosynthetic process|
|zinc ion binding|
|carboxylic acid metabolic process|
|oxoacid metabolic process|
|organic acid metabolic process|
|organonitrogen compound catabolic process|
|organonitrogen compound biosynthetic process|
|small molecule metabolic process|
|organic substance catabolic process|
|cellular catabolic process|
</modal>
\\

 === CRISPR Data ===
<button type='default' size='small' modal='Compound_Hit'>Compound Hit</button>
<button type='default' size='small' modal='Most_Correlated_Genes'>Most Correlated Genes in Chemogenomics</button>
<button type='primary' size='small' modal='Essential_Avana'>Tissues where Essential in the Avana Dataset (DepMap 20Q1)</button>

<modal id='Compound_Hit' size='lg' title='Compound Hit'>
No hits were found.
</modal>

<modal id='Most_Correlated_Genes' size='lg' title='Most Correlated Genes in Chemogenomics'>
No correlation found to any other genes in chemogenomics.
</modal>

<modal id='Essential_Avana' size='lg' title='Tissues where Essential in the Avana Dataset (DepMap 20Q1)'>
Global Fraction of Cell Lines Where Essential: 0/739
^Tissue^Fraction Of Cell Lines Where Essential^
|1290807.0|0/1|
|909776.0|0/1|
|bile duct|0/28|
|blood|0/28|
|bone|0/26|
|breast|0/33|
|central nervous system|0/56|
|cervix|0/4|
|colorectal|0/17|
|esophagus|0/13|
|fibroblast|0/1|
|gastric|0/16|
|kidney|0/21|
|liver|0/20|
|lung|0/75|
|lymphocyte|0/16|
|ovary|0/26|
|pancreas|0/24|
|peripheral nervous system|0/16|
|plasma cell|0/15|
|prostate|0/1|
|skin|0/24|
|soft tissue|0/9|
|thyroid|0/2|
|upper aerodigestive|0/22|
|urinary tract|0/29|
|uterus|0/5|
</modal>

== Essentiality in NALM6  ==
    * **<color #00a2e8>Essentiality Rank</color>**: 12614
    * **<color #00a2e8>Expression level (log2 read counts)</color>**: 0.49 
<button type='primary' size='small' modal='Dist_expr'>Expression Distribution</button>
<modal id='Dist_expr' size='lg' title='BHMT Expression in NALM6 Cells: 0.49'>
{{:chemogenomics:nalm6 dist.png?nolink |}}
</modal>