RPP30 [The Human Chemical-Genetic Interaction Map Project]

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======= RPP30 =======


== Gene Information ==
  * **<color #00a2e8>Official Symbol</color>**: RPP30
  * **<color #00a2e8>Official Name</color>**: ribonuclease P/MRP subunit p30
  * **<color #00a2e8>Aliases and Previous Symbols</color>**: N/A
  * **<color #00a2e8>Entrez ID</color>**: [[https://www.ncbi.nlm.nih.gov/gene/?term=10556|10556]]
  * **<color #00a2e8>UniProt</color>**: [[https://www.uniprot.org/uniprot/P78346|P78346]]
  * **<color #00a2e8>Interactions</color>**: [[https://thebiogrid.org/search.php?search=RPP30&organism=9606|BioGRID]]
  * **<color #00a2e8>PubMed articles</color>**: [[https://www.ncbi.nlm.nih.gov/pubmed/?term=gene%20RPP30|Open PubMed]]
  * **<color #00a2e8>OMIM</color>**: [[https://omim.org/entry/606115|Open OMIM]]

== Function Summary ==
  * **<color #00a2e8>Entrez Summary</color>**: N/A
  * **<color #00a2e8>UniProt Summary</color>**:  Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.

<button type='primary' size='sm' modal='Pfam_Domains'>Pfam Domains</button>
<button type='primary' size='sm' modal='GO_terms'>GO Terms</button>


<modal id='Pfam_Domains' size='lg' title='Pfam Domains'>
|RNase P p30|
</modal>

<modal id='GO_terms' size='lg' title='GO Terms'>
|nucleolar ribonuclease P complex|
|ribonuclease MRP complex|
|multimeric ribonuclease P complex|
|ribonuclease P RNA binding|
|ribonuclease P activity|
|tRNA 5-leader removal|
|tRNA 5-end processing|
|ncRNA 5-end processing|
|RNA 5-end processing|
|RNA phosphodiester bond hydrolysis, endonucleolytic|
|tRNA processing|
|RNA phosphodiester bond hydrolysis|
|tRNA metabolic process|
|rRNA processing|
|rRNA metabolic process|
|nucleic acid phosphodiester bond hydrolysis|
|ribosome biogenesis|
|ncRNA processing|
|ribonucleoprotein complex biogenesis|
|ncRNA metabolic process|
|RNA processing|
|RNA binding|
|RNA metabolic process|
|gene expression|
</modal>
\\

 === CRISPR Data ===
<button type='primary' size='small' modal='Compound_Hit'>Compound Hit</button>
<button type='default' size='small' modal='Most_Correlated_Genes'>Most Correlated Genes in Chemogenomics</button>
<button type='primary' size='small' modal='Essential_Avana'>Tissues where Essential in the Avana Dataset (DepMap 20Q1)</button>

<modal id='Compound_Hit' size='lg' title='Compound Hit'>
^Screen^Score^
|[[:results:exp12|Chloramphenicol 2μM R00 exp12]]|-2.66|
|[[:results:exp27|Pimelic-diphenylamide-106 0.5μM R00 exp27]]|-2.46|
|[[:results:exp217|Mdivi-1 15μM R05 exp217]]|-1.8|
</modal>

<modal id='Most_Correlated_Genes' size='lg' title='Most Correlated Genes in Chemogenomics'>
No correlation found to any other genes in chemogenomics.
</modal>

<modal id='Essential_Avana' size='lg' title='Tissues where Essential in the Avana Dataset (DepMap 20Q1)'>
Global Fraction of Cell Lines Where Essential: 637/739
^Tissue^Fraction Of Cell Lines Where Essential^
|1290807.0|1/1|
|909776.0|1/1|
|bile duct|24/28|
|blood|23/28|
|bone|22/26|
|breast|26/33|
|central nervous system|53/56|
|cervix|3/4|
|colorectal|12/17|
|esophagus|12/13|
|fibroblast|1/1|
|gastric|13/16|
|kidney|17/21|
|liver|17/20|
|lung|68/75|
|lymphocyte|16/16|
|ovary|22/26|
|pancreas|22/24|
|peripheral nervous system|13/16|
|plasma cell|13/15|
|prostate|0/1|
|skin|20/24|
|soft tissue|7/9|
|thyroid|2/2|
|upper aerodigestive|22/22|
|urinary tract|26/29|
|uterus|5/5|
</modal>

== Essentiality in NALM6  ==
    * **<color #00a2e8>Essentiality Rank</color>**: 2779
    * **<color #00a2e8>Expression level (log2 read counts)</color>**: 5.67 
<button type='primary' size='small' modal='Dist_expr'>Expression Distribution</button>
<modal id='Dist_expr' size='lg' title='RPP30 Expression in NALM6 Cells: 5.67'>
{{:chemogenomics:nalm6 dist.png?nolink |}}
</modal>