TCIRG1
Gene Information
- Official Symbol: TCIRG1
- Official Name: T cell immune regulator 1, ATPase H+ transporting V0 subunit a3
- Aliases and Previous Symbols: N/A
- Entrez ID: 10312
- UniProt: Q13488
- Interactions: BioGRID
- PubMed articles: Open PubMed
- OMIM: Open OMIM
Function Summary
- Entrez Summary: This gene encodes a subunit of a large protein complex known as a vacuolar H+-ATPase (V-ATPase). The protein complex acts as a pump to move protons across the membrane. This movement of protons helps regulate the pH of cells and their surrounding environment. V-ATPase dependent organelle acidification is necessary for such intracellular processes as protein sorting, zymogen activation, and receptor-mediated endocytosis. V-ATPase is comprised of a cytosolic V1 domain and a transmembrane V0 domain. Alternative splicing results in multiple transcript variants. Mutations in this gene are associated with infantile malignant osteopetrosis. [provided by RefSeq, May 2017].
- UniProt Summary: Part of the proton channel of V-ATPases (By similarity). Seems to be directly involved in T-cell activation. {ECO:0000250}.
Pfam Domains GO Terms
Pfam Domains
| V ATPase I |
GO Terms
| dentin mineralization |
| response to silver ion |
| memory T cell activation |
| T-helper 1 cell activation |
| osteoclast proliferation |
| vacuolar proton-transporting V-type ATPase, V0 domain |
| hematopoietic stem cell homeostasis |
| protein catabolic process in the vacuole |
| tooth eruption |
| dentinogenesis |
| interferon-gamma secretion |
| enamel mineralization |
| optic nerve development |
| vacuolar proton-transporting V-type ATPase complex |
| tooth mineralization |
| interferon-gamma production |
| vacuolar acidification |
| regulation of proton transport |
| amelogenesis |
| proton-transporting ATPase activity, rotational mechanism |
| bone resorption |
| phagosome acidification |
| T cell homeostasis |
| transferrin transport |
| CD4-positive, alpha-beta T cell activation |
| transporter activity |
| phagosome maturation |
| osteoclast differentiation |
| intracellular pH reduction |
| bone remodeling |
| pH reduction |
| cytokine secretion |
| cranial nerve development |
| cellular defense response |
| lymphocyte homeostasis |
| alpha-beta T cell activation |
| ficolin-1-rich granule membrane |
| leukocyte homeostasis |
| iron ion transport |
| phagocytic vesicle membrane |
| nerve development |
| ATPase binding |
| odontogenesis of dentin-containing tooth |
| regulation of intracellular pH |
| insulin receptor signaling pathway |
| regulation of cellular pH |
| biomineral tissue development |
| biomineralization |
| leukocyte proliferation |
| regulation of pH |
| tissue remodeling |
| B cell differentiation |
| cellular monovalent inorganic cation homeostasis |
| myeloid leukocyte differentiation |
| regulation of osteoblast differentiation |
| odontogenesis |
| transition metal ion transport |
| late endosome |
| T cell differentiation |
| monovalent inorganic cation homeostasis |
| retina development in camera-type eye |
| proton transmembrane transport |
| cytokine production |
| B cell activation |
| immunoglobulin production |
| protein secretion |
| establishment of protein localization to extracellular region |
| macroautophagy |
| cellular response to insulin stimulus |
| protein localization to extracellular region |
| peptide secretion |
| regulation of insulin secretion |
| production of molecular mediator of immune response |
| regulation of ossification |
| tissue homeostasis |
| homeostasis of number of cells |
| immunoglobulin mediated immune response |
| B cell mediated immunity |
| regulation of peptide hormone secretion |
| endosome membrane |
| myeloid cell differentiation |
| response to insulin |
| T cell activation |
| lymphocyte differentiation |
| process utilizing autophagic mechanism |
| ossification |
| autophagy |
| lymphocyte mediated immunity |
| cellular response to peptide hormone stimulus |
| regulation of hormone secretion |
| adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains |
| lysosomal membrane |
| camera-type eye development |
| apical plasma membrane |
| multicellular organismal homeostasis |
| cellular response to peptide |
| leukocyte differentiation |
| regulation of cation transmembrane transport |
| anatomical structure homeostasis |
| eye development |
| visual system development |
| sensory system development |
| response to metal ion |
| lymphocyte activation |
| response to peptide hormone |
| monovalent inorganic cation transport |
| cellular calcium ion homeostasis |
| calcium ion homeostasis |
| regulation of protein secretion |
| cellular divalent inorganic cation homeostasis |
| response to peptide |
| regulation of ion transmembrane transport |
| neutrophil degranulation |
| divalent inorganic cation homeostasis |
| neutrophil activation involved in immune response |
| regulation of peptide secretion |
| inflammatory response |
| neutrophil mediated immunity |
| neutrophil activation |
| granulocyte activation |
| leukocyte degranulation |
| transmembrane receptor protein tyrosine kinase signaling pathway |
| myeloid leukocyte mediated immunity |
| myeloid cell activation involved in immune response |
| response to inorganic substance |
| regulation of hormone levels |
| sensory organ development |
| cell population proliferation |
| hemopoiesis |
| cellular metal ion homeostasis |
| inorganic cation transmembrane transport |
| regulation of transmembrane transport |
| myeloid leukocyte activation |
| cellular response to organonitrogen compound |
| cellular response to hormone stimulus |
| hematopoietic or lymphoid organ development |
| adaptive immune response |
| cation transmembrane transport |
| cellular protein catabolic process |
| metal ion homeostasis |
| leukocyte activation involved in immune response |
| cell activation involved in immune response |
| cellular cation homeostasis |
| metal ion transport |
| cellular ion homeostasis |
| inorganic ion transmembrane transport |
| immune system development |
| cellular response to nitrogen compound |
| protein catabolic process |
| regulation of ion transport |
| regulated exocytosis |
| regulation of protein transport |
| cation homeostasis |
| enzyme linked receptor protein signaling pathway |
| inorganic ion homeostasis |
| regulation of peptide transport |
| cellular chemical homeostasis |
| regulation of establishment of protein localization |
| regulation of secretion by cell |
| leukocyte mediated immunity |
| ion homeostasis |
| exocytosis |
| regulation of secretion |
| cation transport |
| anatomical structure formation involved in morphogenesis |
| cellular homeostasis |
| cellular macromolecule catabolic process |
| response to hormone |
| positive regulation of cell population proliferation |
| apoptotic process |
| leukocyte activation |
| ion transmembrane transport |
| animal organ morphogenesis |
| response to organonitrogen compound |
| secretion by cell |
| cellular response to cytokine stimulus |
| regulation of protein localization |
| export from cell |
| macromolecule catabolic process |
| programmed cell death |
| cellular response to oxygen-containing compound |
| organonitrogen compound catabolic process |
| cell activation |
| response to nitrogen compound |
| immune effector process |
| cell death |
| response to cytokine |
| chemical homeostasis |
| secretion |
| cellular response to endogenous stimulus |
| transmembrane transport |
| defense response |
| ion transport |
| integral component of plasma membrane |
| response to endogenous stimulus |
| protein transport |
| peptide transport |
| response to oxygen-containing compound |
| amide transport |
| establishment of protein localization |
| regulation of cell population proliferation |
| homeostatic process |
| tissue development |
| organic substance catabolic process |
| cellular catabolic process |
| regulation of cell differentiation |
| nitrogen compound transport |
| regulation of transport |
| immune response |
| vesicle-mediated transport |
CRISPR Data
Compound Hit Most Correlated Genes in Chemogenomics Tissues where Essential in the Avana Dataset (DepMap 20Q1)
Compound Hit
| Screen | Score |
|---|---|
| Nicotine 3000μM R08 exp510 | 1.7 |
Most Correlated Genes in Chemogenomics
No correlation found to any other genes in chemogenomics.
Tissues where Essential in the Avana Dataset (DepMap 20Q1)
Global Fraction of Cell Lines Where Essential: 1/739
| Tissue | Fraction Of Cell Lines Where Essential |
|---|---|
| 1290807.0 | 0/1 |
| 909776.0 | 0/1 |
| bile duct | 0/28 |
| blood | 0/28 |
| bone | 0/26 |
| breast | 0/33 |
| central nervous system | 0/56 |
| cervix | 0/4 |
| colorectal | 0/17 |
| esophagus | 0/13 |
| fibroblast | 0/1 |
| gastric | 0/16 |
| kidney | 0/21 |
| liver | 0/20 |
| lung | 0/75 |
| lymphocyte | 0/16 |
| ovary | 0/26 |
| pancreas | 0/24 |
| peripheral nervous system | 0/16 |
| plasma cell | 0/15 |
| prostate | 0/1 |
| skin | 0/24 |
| soft tissue | 0/9 |
| thyroid | 0/2 |
| upper aerodigestive | 0/22 |
| urinary tract | 0/29 |
| uterus | 0/5 |
Essentiality in NALM6
- Essentiality Rank: 2892
- Expression level (log2 read counts): 6.77
Expression Distribution
TCIRG1 Expression in NALM6 Cells: 6.77