GLI3
Gene Information
- Official Symbol: GLI3
- Official Name: GLI family zinc finger 3
- Aliases and Previous Symbols: N/A
- Entrez ID: 2737
- UniProt: P10071
- Interactions: BioGRID
- PubMed articles: Open PubMed
- OMIM: Open OMIM
Function Summary
- Entrez Summary: This gene encodes a protein which belongs to the C2H2-type zinc finger proteins subclass of the Gli family. They are characterized as DNA-binding transcription factors and are mediators of Sonic hedgehog (Shh) signaling. The protein encoded by this gene localizes in the cytoplasm and activates patched Drosophila homolog (PTCH) gene expression. It is also thought to play a role during embryogenesis. Mutations in this gene have been associated with several diseases, including Greig cephalopolysyndactyly syndrome, Pallister-Hall syndrome, preaxial polydactyly type IV, and postaxial polydactyly types A1 and B. [provided by RefSeq, Jul 2008].
- UniProt Summary: Has a dual function as a transcriptional activator and a repressor of the sonic hedgehog (Shh) pathway, and plays a role in limb development. The full-length GLI3 form (GLI3FL) after phosphorylation and nuclear translocation, acts as an activator (GLI3A) while GLI3R, its C-terminally truncated form, acts as a repressor. A proper balance between the GLI3 activator and the repressor GLI3R, rather than the repressor gradient itself or the activator/repressor ratio gradient, specifies limb digit number and identity. In concert with TRPS1, plays a role in regulating the size of the zone of distal chondrocytes, in restricting the zone of PTHLH expression in distal cells and in activating chondrocyte proliferation. Binds to the minimal GLI-consensus sequence 5'-GGGTGGTC-3'. {ECO:0000269|PubMed:10693759, ECO:0000269|PubMed:11238441, ECO:0000269|PubMed:17764085}.
Pfam Domains GO Terms
Pfam Domains
No Pfam Domain information is available for this gene.
GO Terms
| subpallium cell proliferation in forebrain |
| lateral ganglionic eminence cell proliferation |
| lateral semicircular canal development |
| sagittal suture morphogenesis |
| lambdoid suture morphogenesis |
| anterior semicircular canal development |
| nose morphogenesis |
| mammary gland specification |
| smoothened signaling pathway involved in spinal cord motor neuron cell fate specification |
| smoothened signaling pathway involved in ventral spinal cord interneuron specification |
| frontal suture morphogenesis |
| smoothened signaling pathway involved in ventral spinal cord patterning |
| thymocyte apoptotic process |
| mediator complex binding |
| optic nerve morphogenesis |
| forebrain radial glial cell differentiation |
| mammary gland formation |
| smoothened signaling pathway involved in dorsal/ventral neural tube patterning |
| hindgut morphogenesis |
| forebrain dorsal/ventral pattern formation |
| hindgut development |
| cranial suture morphogenesis |
| semicircular canal development |
| cell fate specification involved in pattern specification |
| ventral spinal cord interneuron specification |
| negative thymic T cell selection |
| layer formation in cerebral cortex |
| negative T cell selection |
| radial glial cell differentiation |
| spinal cord motor neuron cell fate specification |
| optic nerve development |
| T cell apoptotic process |
| specification of animal organ identity |
| cell fate commitment involved in pattern specification |
| ventral spinal cord interneuron fate commitment |
| nose development |
| ventral spinal cord interneuron differentiation |
| dorsal/ventral neural tube patterning |
| lymphocyte apoptotic process |
| craniofacial suture morphogenesis |
| embryonic digestive tract morphogenesis |
| thymic T cell selection |
| tongue development |
| positive regulation of chondrocyte differentiation |
| melanocyte differentiation |
| spinal cord dorsal/ventral patterning |
| telencephalon glial cell migration |
| cerebral cortex radial glia guided migration |
| positive regulation of neuroblast proliferation |
| regulation of bone development |
| negative regulation of alpha-beta T cell differentiation |
| forebrain regionalization |
| spinal cord patterning |
| leukocyte apoptotic process |
| subpallium development |
| cell proliferation in forebrain |
| cranial nerve morphogenesis |
| cerebral cortex radially oriented cell migration |
| histone acetyltransferase binding |
| liver regeneration |
| negative regulation of smoothened signaling pathway |
| proximal/distal pattern formation |
| pigment cell differentiation |
| regulation of neuroblast proliferation |
| positive regulation of cartilage development |
| neuron fate specification |
| spinal cord motor neuron differentiation |
| neural tube patterning |
| embryonic digestive tract development |
| animal organ formation |
| ciliary base |
| glial cell migration |
| positive regulation of protein import into nucleus |
| negative regulation of alpha-beta T cell activation |
| T cell selection |
| positive regulation of protein import |
| positive regulation of stem cell proliferation |
| developmental pigmentation |
| cell differentiation involved in kidney development |
| prostate gland development |
| cerebral cortex cell migration |
| mammary gland morphogenesis |
| negative regulation of T cell differentiation |
| branching involved in ureteric bud morphogenesis |
| ciliary tip |
| positive regulation of alpha-beta T cell differentiation |
| T cell differentiation in thymus |
| digestive tract morphogenesis |
| ventral spinal cord development |
| regulation of chondrocyte differentiation |
| cranial nerve development |
| positive regulation of neural precursor cell proliferation |
| negative regulation of lymphocyte differentiation |
| ureteric bud morphogenesis |
| mesonephric tubule morphogenesis |
| cell differentiation in spinal cord |
| regulation of protein import into nucleus |
| transcriptional repressor complex |
| telencephalon cell migration |
| regulation of protein import |
| positive regulation of osteoblast differentiation |
| positive regulation of alpha-beta T cell activation |
| forebrain cell migration |
| embryonic digit morphogenesis |
| regulation of alpha-beta T cell differentiation |
| positive regulation of nucleocytoplasmic transport |
| neuron fate commitment |
| nephron tubule morphogenesis |
| regulation of stem cell proliferation |
| forebrain generation of neurons |
| cranial skeletal system development |
| nephron epithelium morphogenesis |
| nephron morphogenesis |
| renal tubule morphogenesis |
| oligodendrocyte differentiation |
| regulation of cartilage development |
| smoothened signaling pathway |
| animal organ regeneration |
| positive regulation of protein localization to nucleus |
| neural precursor cell proliferation |
| response to estrogen |
| regulation of smoothened signaling pathway |
| nephron tubule development |
| nerve development |
| renal tubule development |
| dorsal/ventral pattern formation |
| hippocampus development |
| odontogenesis of dentin-containing tooth |
| positive regulation of T cell differentiation |
| metanephros development |
| beta-catenin binding |
| kidney morphogenesis |
| positive regulation of ossification |
| ureteric bud development |
| artery development |
| mesonephric epithelium development |
| mesonephric tubule development |
| cell fate specification |
| regulation of neural precursor cell proliferation |
| roof of mouth development |
| mesonephros development |
| pigmentation |
| regulation of alpha-beta T cell activation |
| embryonic skeletal system morphogenesis |
| positive regulation of lymphocyte differentiation |
| nephron epithelium development |
| gland morphogenesis |
| negative regulation of leukocyte differentiation |
| axoneme |
| regulation of nucleocytoplasmic transport |
| spinal cord development |
| limbic system development |
| negative regulation of T cell activation |
| histone deacetylase binding |
| regulation of osteoblast differentiation |
| camera-type eye morphogenesis |
| bone morphogenesis |
| cerebral cortex development |
| regulation of protein localization to nucleus |
| odontogenesis |
| negative regulation of leukocyte cell-cell adhesion |
| nephron development |
| liver development |
| embryonic limb morphogenesis |
| embryonic appendage morphogenesis |
| embryonic skeletal system development |
| mammary gland development |
| kidney epithelium development |
| hepaticobiliary system development |
| digestive tract development |
| branching morphogenesis of an epithelial tube |
| T cell differentiation |
| negative regulation of hemopoiesis |
| regulation of T cell differentiation |
| digestive system development |
| negative regulation of lymphocyte activation |
| positive regulation of leukocyte differentiation |
| eye morphogenesis |
| appendage morphogenesis |
| limb morphogenesis |
| positive regulation of intracellular protein transport |
| regeneration |
| protein processing |
| morphogenesis of a branching epithelium |
| neural tube development |
| morphogenesis of a branching structure |
| regulation of lymphocyte differentiation |
| lung development |
| glial cell differentiation |
| respiratory tube development |
| pallium development |
| negative regulation of cell-cell adhesion |
| negative regulation of canonical Wnt signaling pathway |
| negative regulation of leukocyte activation |
| central nervous system neuron differentiation |
| appendage development |
| limb development |
| positive regulation of hemopoiesis |
| regulation of ossification |
| inner ear development |
| respiratory system development |
| negative regulation of cell activation |
| cilium |
| bone development |
| positive regulation of T cell activation |
| positive regulation of intracellular transport |
| negative regulation of Wnt signaling pathway |
| gliogenesis |
| positive regulation of leukocyte cell-cell adhesion |
| anterior/posterior pattern specification |
| ear development |
| protein maturation |
| negative regulation of neuron differentiation |
| regulation of intracellular protein transport |
| T cell activation |
| lymphocyte differentiation |
| skeletal system morphogenesis |
| cell fate commitment |
| positive regulation of cell-cell adhesion |
| sensory organ morphogenesis |
| telencephalon development |
| axon guidance |
| neuron projection guidance |
| kidney development |
| negative regulation of cell adhesion |
| regulation of leukocyte differentiation |
| regulation of canonical Wnt signaling pathway |
| renal system development |
| embryonic organ morphogenesis |
| negative regulation of neurogenesis |
| regulation of leukocyte cell-cell adhesion |
| epithelial tube morphogenesis |
| negative regulation of nervous system development |
| RNA polymerase II regulatory region sequence-specific DNA binding |
| camera-type eye development |
| regulation of T cell activation |
| urogenital system development |
| positive regulation of cellular protein localization |
| leukocyte differentiation |
| regionalization |
| negative regulation of cell development |
| regulation of intracellular transport |
| eye development |
| positive regulation of lymphocyte activation |
| regulation of Wnt signaling pathway |
| visual system development |
| sensory system development |
| axonogenesis |
| in utero embryonic development |
| lymphocyte activation |
| forebrain development |
| developmental growth |
| growth |
| chromatin binding |
| regulation of cell-cell adhesion |
| nuclear speck |
| positive regulation of cell adhesion |
| positive regulation of leukocyte activation |
| axon development |
| gland development |
| positive regulation of cell activation |
| reproductive structure development |
| positive regulation of protein transport |
| reproductive system development |
| morphogenesis of an epithelium |
| cell morphogenesis involved in neuron differentiation |
| embryonic organ development |
| pattern specification process |
| negative regulation of immune system process |
| DNA-binding transcription activator activity, RNA polymerase II-specific |
| regulation of hemopoiesis |
| positive regulation of establishment of protein localization |
| positive regulation of neurogenesis |
| wound healing |
| neuron projection morphogenesis |
| plasma membrane bounded cell projection morphogenesis |
| blood vessel development |
| cell projection morphogenesis |
| skeletal system development |
| RNA polymerase II proximal promoter sequence-specific DNA binding |
| vasculature development |
| cell part morphogenesis |
| regulation of lymphocyte activation |
| cardiovascular system development |
| heart development |
| positive regulation of nervous system development |
| regulation of cellular protein localization |
| positive regulation of cell development |
| sensory organ development |
| chemotaxis |
| taxis |
| cell population proliferation |
| cell morphogenesis involved in differentiation |
| hemopoiesis |
| tissue morphogenesis |
| embryonic morphogenesis |
| response to wounding |
| regulation of leukocyte activation |
| hematopoietic or lymphoid organ development |
| chordate embryonic development |
| regulation of cell activation |
| immune system development |
| embryo development ending in birth or egg hatching |
| tube morphogenesis |
| regulation of neuron differentiation |
| neuron projection development |
| developmental process involved in reproduction |
| DNA-binding transcription factor activity |
| negative regulation of cell population proliferation |
| regulation of cell adhesion |
| regulation of protein transport |
| negative regulation of cell differentiation |
| cell morphogenesis |
| regulation of peptide transport |
| brain development |
| regulation of establishment of protein localization |
| head development |
| neuron development |
| regulation of neurogenesis |
| cellular component morphogenesis |
| tube development |
| negative regulation of transcription by RNA polymerase II |
| circulatory system development |
| negative regulation of apoptotic process |
| anatomical structure formation involved in morphogenesis |
| negative regulation of programmed cell death |
| positive regulation of cell population proliferation |
| regulation of cellular localization |
| apoptotic process |
| regulation of nervous system development |
| leukocyte activation |
| regulation of cell development |
| negative regulation of developmental process |
| animal organ morphogenesis |
| cell migration |
| positive regulation of cell differentiation |
| embryo development |
| central nervous system development |
| positive regulation of transport |
| negative regulation of cell death |
| neuron differentiation |
| regulation of protein localization |
| programmed cell death |
| cell activation |
| localization of cell |
| cell motility |
| cell death |
| epithelium development |
| plasma membrane bounded cell projection organization |
| positive regulation of immune system process |
| cell projection organization |
| negative regulation of transcription, DNA-templated |
| negative regulation of multicellular organismal process |
| positive regulation of transcription by RNA polymerase II |
| negative regulation of nucleic acid-templated transcription |
| negative regulation of RNA biosynthetic process |
| negative regulation of signal transduction |
| proteolysis |
| locomotion |
| negative regulation of RNA metabolic process |
| negative regulation of cell communication |
| negative regulation of signaling |
| positive regulation of developmental process |
| negative regulation of cellular macromolecule biosynthetic process |
| reproductive process |
| reproduction |
| negative regulation of nucleobase-containing compound metabolic process |
| negative regulation of macromolecule biosynthetic process |
| negative regulation of cellular biosynthetic process |
| generation of neurons |
| positive regulation of transcription, DNA-templated |
| regulation of apoptotic process |
| negative regulation of biosynthetic process |
| movement of cell or subcellular component |
| DNA-binding transcription factor activity, RNA polymerase II-specific |
| regulation of programmed cell death |
| regulation of cell population proliferation |
| negative regulation of response to stimulus |
| neurogenesis |
| positive regulation of nucleic acid-templated transcription |
| positive regulation of RNA biosynthetic process |
| cell development |
| regulation of immune system process |
| regulation of cell death |
| negative regulation of gene expression |
| positive regulation of RNA metabolic process |
| positive regulation of multicellular organismal process |
| tissue development |
| regulation of cell differentiation |
| regulation of transport |
| positive regulation of nucleobase-containing compound metabolic process |
| positive regulation of macromolecule biosynthetic process |
| positive regulation of cellular biosynthetic process |
| positive regulation of gene expression |
| gene expression |
| positive regulation of biosynthetic process |
CRISPR Data
Compound Hit Most Correlated Genes in Chemogenomics Tissues where Essential in the Avana Dataset (DepMap 20Q1)
Compound Hit
Most Correlated Genes in Chemogenomics
No correlation found to any other genes in chemogenomics.
Tissues where Essential in the Avana Dataset (DepMap 20Q1)
Global Fraction of Cell Lines Where Essential: 0/739
| Tissue | Fraction Of Cell Lines Where Essential |
|---|---|
| 1290807.0 | 0/1 |
| 909776.0 | 0/1 |
| bile duct | 0/28 |
| blood | 0/28 |
| bone | 0/26 |
| breast | 0/33 |
| central nervous system | 0/56 |
| cervix | 0/4 |
| colorectal | 0/17 |
| esophagus | 0/13 |
| fibroblast | 0/1 |
| gastric | 0/16 |
| kidney | 0/21 |
| liver | 0/20 |
| lung | 0/75 |
| lymphocyte | 0/16 |
| ovary | 0/26 |
| pancreas | 0/24 |
| peripheral nervous system | 0/16 |
| plasma cell | 0/15 |
| prostate | 0/1 |
| skin | 0/24 |
| soft tissue | 0/9 |
| thyroid | 0/2 |
| upper aerodigestive | 0/22 |
| urinary tract | 0/29 |
| uterus | 0/5 |
Essentiality in NALM6
- Essentiality Rank: 12031
- Expression level (log2 read counts): 5.14
Expression Distribution
GLI3 Expression in NALM6 Cells: 5.14