LIMCH1
Gene Information
- Official Symbol: LIMCH1
- Official Name: LIM and calponin homology domains 1
- Aliases and Previous Symbols: N/A
- Entrez ID: 22998
- UniProt: Q9UPQ0
- Interactions: BioGRID
- PubMed articles: Open PubMed
- OMIM: Open OMIM
Function Summary
- Entrez Summary: N/A
- UniProt Summary: N/A
Pfam Domains GO Terms
Pfam Domains
| CH |
| LIM |
GO Terms
| myosin II head/neck binding |
| myosin II complex |
| positive regulation of stress fiber assembly |
| regulation of focal adhesion assembly |
| regulation of cell-substrate junction assembly |
| positive regulation of actin filament bundle assembly |
| regulation of adherens junction organization |
| stress fiber |
| regulation of stress fiber assembly |
| regulation of actomyosin structure organization |
| regulation of cell junction assembly |
| regulation of actin filament bundle assembly |
| regulation of cell-matrix adhesion |
| actomyosin structure organization |
| positive regulation of supramolecular fiber organization |
| regulation of cell-substrate adhesion |
| positive regulation of cytoskeleton organization |
| negative regulation of cell migration |
| regulation of actin filament organization |
| actin binding |
| negative regulation of cell motility |
| negative regulation of cellular component movement |
| negative regulation of locomotion |
| regulation of actin cytoskeleton organization |
| regulation of supramolecular fiber organization |
| regulation of actin filament-based process |
| actin cytoskeleton organization |
| positive regulation of cellular component biogenesis |
| regulation of cytoskeleton organization |
| actin filament-based process |
| positive regulation of organelle organization |
| regulation of cell adhesion |
| regulation of cell migration |
| regulation of cell motility |
| regulation of cellular component biogenesis |
| regulation of locomotion |
| regulation of cellular component movement |
| positive regulation of protein phosphorylation |
| positive regulation of phosphorylation |
| cytoskeleton organization |
| positive regulation of phosphorus metabolic process |
| positive regulation of phosphate metabolic process |
| positive regulation of cellular component organization |
| positive regulation of protein modification process |
| regulation of organelle organization |
| regulation of protein phosphorylation |
| regulation of phosphorylation |
| positive regulation of cellular protein metabolic process |
| positive regulation of protein metabolic process |
| regulation of phosphate metabolic process |
| regulation of phosphorus metabolic process |
| regulation of protein modification process |
CRISPR Data
Compound Hit Most Correlated Genes in Chemogenomics Tissues where Essential in the Avana Dataset (DepMap 20Q1)
Compound Hit
| Screen | Score |
|---|---|
| BRD2 inhibitor II 20μM R07 exp341 | -1.75 |
| Myriocin 25μM R06 exp293 | 1.86 |
Most Correlated Genes in Chemogenomics
| Gene | Correlation |
|---|---|
| RRM1 | 0.427 |
Tissues where Essential in the Avana Dataset (DepMap 20Q1)
Global Fraction of Cell Lines Where Essential: 0/739
| Tissue | Fraction Of Cell Lines Where Essential |
|---|---|
| 1290807.0 | 0/1 |
| 909776.0 | 0/1 |
| bile duct | 0/28 |
| blood | 0/28 |
| bone | 0/26 |
| breast | 0/33 |
| central nervous system | 0/56 |
| cervix | 0/4 |
| colorectal | 0/17 |
| esophagus | 0/13 |
| fibroblast | 0/1 |
| gastric | 0/16 |
| kidney | 0/21 |
| liver | 0/20 |
| lung | 0/75 |
| lymphocyte | 0/16 |
| ovary | 0/26 |
| pancreas | 0/24 |
| peripheral nervous system | 0/16 |
| plasma cell | 0/15 |
| prostate | 0/1 |
| skin | 0/24 |
| soft tissue | 0/9 |
| thyroid | 0/2 |
| upper aerodigestive | 0/22 |
| urinary tract | 0/29 |
| uterus | 0/5 |
Essentiality in NALM6
- Essentiality Rank: 3021
- Expression level (log2 read counts): 2.62
Expression Distribution
LIMCH1 Expression in NALM6 Cells: 2.62