WDR33
Gene Information
- Official Symbol: WDR33
- Official Name: WD repeat domain 33
- Aliases and Previous Symbols: N/A
- Entrez ID: 55339
- UniProt: Q9C0J8
- Interactions: BioGRID
- PubMed articles: Open PubMed
- OMIM: Open OMIM
Function Summary
- Entrez Summary: N/A
- UniProt Summary: Essential for both cleavage and polyadenylation of pre- mRNA 3' ends. {ECO:0000269|PubMed:19217410}.
Pfam Domains GO Terms
Pfam Domains
| WD40 |
| Collagen |
GO Terms
| mRNA cleavage and polyadenylation specificity factor complex |
| mRNA polyadenylation |
| RNA polyadenylation |
| termination of RNA polymerase II transcription |
| postreplication repair |
| collagen trimer |
| DNA-templated transcription, termination |
| mRNA 3-end processing |
| mRNA-containing ribonucleoprotein complex export from nucleus |
| mRNA export from nucleus |
| ribonucleoprotein complex export from nucleus |
| ribonucleoprotein complex localization |
| RNA export from nucleus |
| fibrillar center |
| RNA 3-end processing |
| protein export from nucleus |
| mRNA transport |
| nuclear export |
| RNA transport |
| nucleic acid transport |
| establishment of RNA localization |
| RNA localization |
| nucleobase-containing compound transport |
| protein-containing complex localization |
| nucleocytoplasmic transport |
| nuclear transport |
| mRNA splicing, via spliceosome |
| RNA splicing, via transesterification reactions with bulged adenosine as nucleophile |
| RNA splicing, via transesterification reactions |
| RNA splicing |
| mRNA processing |
| transcription by RNA polymerase II |
| DNA repair |
| spermatogenesis |
| male gamete generation |
| transcription, DNA-templated |
| nucleic acid-templated transcription |
| RNA biosynthetic process |
| gamete generation |
| mRNA metabolic process |
| DNA metabolic process |
| cellular response to DNA damage stimulus |
| multicellular organismal reproductive process |
| sexual reproduction |
| multicellular organism reproduction |
| RNA processing |
| multi-organism reproductive process |
| intracellular protein transport |
| nucleobase-containing compound biosynthetic process |
| heterocycle biosynthetic process |
| aromatic compound biosynthetic process |
| organic cyclic compound biosynthetic process |
| RNA binding |
| reproductive process |
| reproduction |
| protein transport |
| intracellular transport |
| peptide transport |
| amide transport |
| cellular protein localization |
| cellular macromolecule localization |
| establishment of protein localization |
| cellular nitrogen compound biosynthetic process |
| RNA metabolic process |
| cellular response to stress |
| cellular macromolecule biosynthetic process |
| macromolecule biosynthetic process |
| establishment of localization in cell |
| nitrogen compound transport |
| gene expression |
CRISPR Data
Compound Hit Most Correlated Genes in Chemogenomics Tissues where Essential in the Avana Dataset (DepMap 20Q1)
Compound Hit
| Screen | Score |
|---|---|
| Hydroxyurea 100μM R07 exp329 | -2.35 |
| Tubastatin-A 2.5μM R07 exp417 | -2.15 |
| TIC10 10μM R08 exp532 | -1.86 |
| Torin1 0.08μM R02 exp82 | -1.85 |
| Monensin 0.3μM R08 exp507 | -1.82 |
| NMS-873 0.07μM R07 exp380 | -1.71 |
| Senexin-A 25μM R07 exp400 | -1.71 |
| 1-Methyl-nicotinamide-chloride 1000μM R03 exp113 | 1.8 |
| MS023 2μM R03 exp134 | 2.35 |
Most Correlated Genes in Chemogenomics
No correlation found to any other genes in chemogenomics.
Tissues where Essential in the Avana Dataset (DepMap 20Q1)
Global Fraction of Cell Lines Where Essential: 12/739
| Tissue | Fraction Of Cell Lines Where Essential |
|---|---|
| 1290807.0 | 0/1 |
| 909776.0 | 0/1 |
| bile duct | 0/28 |
| blood | 2/28 |
| bone | 0/26 |
| breast | 0/33 |
| central nervous system | 2/56 |
| cervix | 0/4 |
| colorectal | 0/17 |
| esophagus | 0/13 |
| fibroblast | 0/1 |
| gastric | 0/16 |
| kidney | 0/21 |
| liver | 0/20 |
| lung | 1/75 |
| lymphocyte | 0/16 |
| ovary | 0/26 |
| pancreas | 0/24 |
| peripheral nervous system | 1/16 |
| plasma cell | 0/15 |
| prostate | 0/1 |
| skin | 1/24 |
| soft tissue | 0/9 |
| thyroid | 0/2 |
| upper aerodigestive | 0/22 |
| urinary tract | 1/29 |
| uterus | 0/5 |
Essentiality in NALM6
- Essentiality Rank: 539
- Expression level (log2 read counts): 7.62
Expression Distribution
WDR33 Expression in NALM6 Cells: 7.62