Doxycycline 10μM R00 exp18
Mechanism of Action
Inhibits bacterial 30S ribosome, also used in tet-on/tet-off gene expression control
- Class / Subclass 1: Infectious Disease / Antibiotic
- Class / Subclass 2: Organelle Function / Mitochondrial Inhibitor
Technical Notes
Compound References
- PubChem Name: (4S,5S,6R,12Ar)-4-(dimethylamino)-1,5,10,11,12a-pentahydroxy-6-methyl-3,12-dioxo-4a,5,5a,6-tetrahydro-4H-tetracene-2-carboxamide;ethanol;hydrate;dihydrochloride
- Synonyms: Doxycycline hydrochloride hemiethanolate hemihydrate; WC2031
- CAS #: 24390-14-5
- PubChem CID: 54713024
- IUPAC: (4S,5S,6R,12aR)-4-(dimethylamino)-1,5,10,11,12a-pentahydroxy-6-methyl-3,12-dioxo-4a,5,5a,6-tetrahydro-4H-tetracene-2-carboxamide;ethanol;hydrate;dihydrochloride
- INCHI Name: InChI=1S/2C22H24N2O8.C2H6O.2ClH.H2O/c2*1-7-8-5-4-6-9(25)11(8)16(26)12-10(7)17(27)14-15(24(2)3)18(28)13(21(23)31)20(30)22(14,32)19(12)29;1-2-3;;;/h2*4-7,10,14-15,17,25-27,30,32H,1-3H3,(H2,23,31);3H,2H2,1H3;2*1H;1H2/t2*7-,10?,14?,15-,17-,22-;;;;/m00…./s1
- INCHI Key: UHHHTIKWXBRCLT-ZVACAFRPSA-N
- Molecular Weight: 1025.9
- Canonical SMILES: CCO.CC1C2C(C3C(C(=O)C(=C(C3(C(=O)C2=C(C4=C1C=CC=C4O)O)O)O)C(=O)N)N(C)C)O.CC1C2C(C3C(C(=O)C(=C(C3(C(=O)C2=C(C4=C1C=CC=C4O)O)O)O)C(=O)N)N(C)C)O.O.Cl.Cl
- Isomeric SMILES: CCO.C[C@@H]1C2[C@@H](C3[C@@H](C(=O)C(=C([C@]3(C(=O)C2=C(C4=C1C=CC=C4O)O)O)O)C(=O)N)N(C)C)O.C[C@@H]1C2[C@@H](C3[C@@H](C(=O)C(=C([C@]3(C(=O)C2=C(C4=C1C=CC=C4O)O)O)O)C(=O)N)N(C)C)O.O.Cl.Cl
- Molecular Formula: C46H58Cl2N4O18
Compound Supplier
- Supplier Name: Sigma-Aldrich
- Catalog #: D9891
- Lot #: N/A
Compound Characterization
- HRMS (ESI-TOF) m/z: (M+H)+ Calcd for C22H24N2O8 445.16054; found 445.16062
Dose Response Curve
- Platform ID: Doxycycline
- Min: -7.7668; Max: 84.0484
| IC | Concentration (µM) |
|---|---|
| IC10 | N/A |
| IC20 | 7.7242 |
| IC30 | 11.6118 |
| IC40 | 16.2192 |
| IC50 | 22.0401 |
| IC60 | N/A |
| IC70 | N/A |
| IC80 | N/A |
| IC90 | N/A |
Screen Summary
- Round: 00
- Dose: 10µM
- Days of incubation: 8
- Doublings: 5.5
- Numbers of reads: 10390117
Screen Results
| Sensitive/Resistant hits (FDR<0.05) | CRANKS | Score Plot | Top 30 Genes | Screen Similarity | Top 30 Sensitive GO terms | Top 30 Resistant GO terms |
|---|---|---|---|---|---|---|
| 4/17 | Scores |