Table of Contents
Suberoylanilide-Hydroxamic-Acid 0.02μM R01 exp53
Mechanism of Action
Technical Notes
Screen Summary
Screen Results
Suberoylanilide-Hydroxamic-Acid 0.02μM R01 exp53
Mechanism of Action
Inhibits class I, II, IV HDACs, chelates active site zinc ion
Class / Subclass 1:
Gene Regulation / Epigenetic Inhibitor
Technical Notes
Protein References
PubChem Name:
Vorinostat
Synonyms:
SAHA
CAS #:
149647-78-9
PubChem CID:
5311
IUPAC:
N'-hydroxy-N-phenyloctanediamide
INCHI Name:
InChI=1S/C14H20N2O3/c17-13(15-12-8-4-3-5-9-12)10-6-1-2-7-11-14(18)16-19/h3-5,8-9,19H,1-2,6-7,10-11H2,(H,15,17)(H,16,18)
INCHI Key:
WAEXFXRVDQXREF-UHFFFAOYSA-N
Molecular Weight:
264.32
Canonical SMILES:
C1=CC=C(C=C1)NC(=O)CCCCCCC(=O)NO
Isomeric SMILES:
N/A
Molecular Formula:
C14H20N2O3
Protein Supplier
Supplier Name:
Tocris Bioscience
Catalog #:
4652
Lot #:
N/A
Protein Characterization
HRMS (ESI-TOF) m/z:
(M+H)+ Calcd for C14H20N2O3 265.15467; found 265.15439
Dose Response Curve
Dose response curve not available.
Screen Summary
Round
: 01
Dose
: 20nM
Days of incubation
: 8
Doublings
: 7.1
Numbers of reads
: 9593321
Screen Results
Sensitive/Resistant hits (FDR<0.05)
CRANKS
Score Plot
Top 30 Genes
Screen Similarity
Top 30 Sensitive GO terms
Top 30 Resistant GO terms
0/0
Scores
View
View
View
View
View
×
Suberoylanilide-Hydroxamic-Acid 0.02μM R01 exp53
×
Top 30 S/R Genes
Gene
CRANKS Score
FDR
CXorf67
-2.92
0.24
STT3A
-2.84
0.58
DLG3
-2.68
0.57
GMPPB
-2.64
0.54
UBA3
-2.52
0.74
CBX3
-2.33
0.54
VEZT
-2.33
0.54
C10orf90
-2.29
0.74
OIP5
-2.28
0.57
CAD
-2.22
0.70
GGCX
-2.22
0.54
NBAS
-2.22
0.54
PCYT1B
-2.20
0.58
ZNF391
-2.19
0.54
RUNX1
-2.17
0.74
KPNA5
-2.17
0.75
TRAPPC4
-2.17
0.63
RIC3
-2.15
0.64
MORN1
-2.12
0.64
AHCY
-2.12
0.57
TXNL4B
-2.10
0.64
TGS1
-2.08
0.54
CUL2
-2.08
0.74
HCFC1R1
-2.06
0.74
CLP1
-2.06
0.74
BCORL1
-2.06
0.74
ORAOV1
-2.06
0.58
TOP1
-2.06
0.74
DDX39A
-2.05
0.57
AKR1C1
-2.03
0.74
PSMD7
2.14
0.74
PSMB1
2.15
0.55
COPS4
2.16
0.63
ZNF598
2.17
0.55
CNOT3
2.19
0.55
PSMD6
2.26
0.58
ZNF397
2.27
0.37
NUP155
2.28
0.57
RAN
2.30
0.37
AAAS
2.33
0.50
PLA2G4E
2.35
0.50
NPAP1
2.35
0.55
SUPT6H
2.35
0.63
ATP13A3
2.37
0.37
DES
2.38
0.37
AP2A1
2.39
0.50
TSPY1
2.42
0.37
ACO2
2.42
0.63
STON2
2.43
0.37
PDE12
2.52
0.37
UQCRH
2.52
0.50
IRX3
2.53
0.37
ARRDC3
2.54
0.37
ATXN1
2.56
0.50
CDC37L1
2.57
0.50
ZCCHC9
2.57
0.37
GNL2
2.64
0.37
RAD51
2.66
0.63
P2RY11
2.73
0.37
PSMD14
2.89
0.50
×
Correlated Screens
Screen
Correlation
Plot
UM131593 0.1μM R01 exp58
0.056
View
NFN1 0.1μM R01 exp49
0.054
View
2-Methoxyestradiol 0.2μM R01 exp40
0.052
View
×
Suberoylanilide-Hydroxamic-Acid 0.02μM R01 exp53 vs UM131593 0.1μM R01 exp58
×
NFN1 0.1μM R01 exp49 vs Suberoylanilide-Hydroxamic-Acid 0.02μM R01 exp53
×
2-Methoxyestradiol 0.2μM R01 exp40 vs Suberoylanilide-Hydroxamic-Acid 0.02μM R01 exp53
×
Top 30 sensitive GO terms
No GO term hits below threshold. (FDR <0.05)
×
Top 30 resistant GO terms
GO Term
Fold Change
Genes
proteasome regulatory particle
91.97
PSMD14,PSMD6,PSMD7
proteasome accessory complex
75.25
PSMD14,PSMD6,PSMD7
endopeptidase complex
26.59
PSMD14,PSMD6,PSMB1,PSMD7
nuclear pore
23.99
NPAP1,AAAS,RAN,NUP155
RNA transport
19.71
SUPT6H,NPAP1,AAAS,RAN,NUP155
nucleic acid transport
19.71
SUPT6H,NPAP1,AAAS,RAN,NUP155
establishment of RNA localization
19.43
SUPT6H,NPAP1,AAAS,RAN,NUP155
RNA localization
17.03
SUPT6H,NPAP1,AAAS,RAN,NUP155