| GO Term | Fold Change | Genes |
| GATOR1 complex | 637.27 | NPRL3,NPRL2 |
| Seh1-associated complex | 273.12 | NPRL3,DEPDC5,NPRL2 |
| negative regulation of TORC1 signaling | 108.80 | NPRL3,DEPDC5,ITFG2,SZT2,NPRL2,PRKAA1,STK11 |
| negative regulation of TOR signaling | 67.59 | NPRL3,DEPDC5,ITFG2,SZT2,NPRL2,PRKAA1,STK11 |
| cellular response to amino acid starvation | 66.38 | NPRL3,DEPDC5,ITFG2,SZT2,NPRL2 |
| response to amino acid starvation | 62.48 | NPRL3,DEPDC5,ITFG2,SZT2,NPRL2 |
| regulation of TORC1 signaling | 59.28 | NPRL3,DEPDC5,ITFG2,SZT2,NPRL2,OTUB1,PRKAA1,STK11 |
| cellular response to glucose starvation | 39.83 | ITFG2,SZT2,PRKAA1 |
| regulation of TOR signaling | 33.04 | NPRL3,DEPDC5,ITFG2,SZT2,NPRL2,PRKAA1,STK11 |
| positive regulation of autophagy | 26.19 | GSK3B,NPRL3,DEPDC5,NPRL2,PRKAA1,STK11 |
| cellular response to starvation | 22.36 | NPRL3,DEPDC5,ITFG2,SZT2,NPRL2,PRKAA1 |
| response to starvation | 18.21 | NPRL3,DEPDC5,ITFG2,SZT2,NPRL2,PRKAA1 |
| cellular response to nutrient levels | 16.41 | NPRL3,DEPDC5,ITFG2,SZT2,NPRL2,PRKAA1 |
| cellular response to extracellular stimulus | 14.59 | NPRL3,DEPDC5,ITFG2,SZT2,NPRL2,PRKAA1 |
| negative regulation of intracellular signal transduction | 12.45 | GSK3B,NPRL3,DEPDC5,ITFG2,SZT2,NPRL2,IVNS1ABP,PRKAA1,BCL6,STK11 |
| positive regulation of cellular catabolic process | 12.22 | GSK3B,NPRL3,DEPDC5,NPRL2,PRKAA1,STK11 |
| cellular response to external stimulus | 11.69 | NPRL3,DEPDC5,ITFG2,SZT2,NPRL2,PRKAA1 |
| regulation of autophagy | 10.99 | GSK3B,NPRL3,DEPDC5,NPRL2,PRKAA1,STK11 |
| regulation of cellular catabolic process | 6.93 | GSK3B,NPRL3,DEPDC5,NPRL2,PRKAA1,ELAVL1,STK11 |