MS023 7μM R03 exp135

MS023 7μM R03 exp135

Mechanism of Action

Inhibits protein arginine N-methyltransferase PRMT1

Class / Subclass 1: Gene Regulation / Epigenetic Inhibitor

Technical Notes

Compound References

PubChem Name: MS023 (dihydrochloride)
Synonyms: N/A
CAS #: 1992047-64-9
PubChem CID: 121513886
IUPAC: N'-methyl-N'-[[4-(4-propan-2-yloxyphenyl)-1H-pyrrol-3-yl]methyl]ethane-1,2-diamine;dihydrochloride
INCHI Name: InChI=1S/C17H25N3O.2ClH/c1-13(2)21-16-6-4-14(5-7-16)17-11-19-10-15(17)12-20(3)9-8-18;;/h4-7,10-11,13,19H,8-9,12,18H2,1-3H3;2*1H
INCHI Key: HCNXCUFNZWGILO-UHFFFAOYSA-N
Molecular Weight: 360.3
Canonical SMILES: CC(C)OC1=CC=C(C=C1)C2=CNC=C2CN(C)CCN.Cl.Cl
Isomeric SMILES: N/A
Molecular Formula: C17H27Cl2N3O

Compound Supplier

Supplier Name: Structural Genomics Consortium
Catalog #: N/A
Lot #: N/A

Compound Characterization

HRMS (ESI-TOF) m/z: (M+H)+ Calcd for C17H25N3O 288.20704; found 288.20735

Dose Response Curve

Platform ID: MS023
Min: -6.0031; Max: 44.7664

IC	Concentration (µM)
IC10	N/A
IC20	3.5114
IC30	7.8192
IC40	15.0721
IC50	N/A
IC60	N/A
IC70	N/A
IC80	N/A
IC90	N/A

Screen Summary

Round: 03
Dose: 7µM
Days of incubation: 8
Doublings: 2.6
Numbers of reads: 13404640

Screen Results

Sensitive/Resistant hits (FDR<0.05)	CRANKS	Score Plot	Top 30 Genes	Screen Similarity	Top 30 Sensitive GO terms	Top 30 Resistant GO terms
0/90	Scores	View	View	View	View	View

Gene	CRANKS Score	FDR
USP39	-2.73	0.18
DRC1	-2.72	0.11
CDC73	-2.66	0.24
PSMD14	-2.47	0.56
NELFA	-2.46	0.19
STK3	-2.42	0.18
PDZK1	-2.40	0.18
LRMP	-2.36	0.24
NDC80	-2.35	0.57
PTPN2	-2.34	0.19
ADAM10	-2.29	0.19
SNORD95	-2.28	0.26
RNF20	-2.25	0.37
KCTD15	-2.23	0.27
ALMS1	-2.21	0.27
LLGL1	-2.21	0.24
ZFAND5	-2.19	0.24
EPB41L3	-2.17	0.31
SCAF1	-2.14	0.63
SPATA5L1	-2.12	0.27
KIAA1614	-2.11	0.37
CHCHD4	-2.10	0.27
CA9	-2.08	0.27
POLD3	-2.06	0.68
ADCY10	-2.06	0.42
TTC1	-2.05	0.51
MED17	-2.03	0.44
EP300	-2.01	0.57
FAM173B	-2.01	0.36
GSTM5	-2.00	0.48
DPH5	3.25	<0.01
METAP2	3.31	<0.01
PRAMEF26	3.36	0.06
PRAMEF25	3.36	0.06
GNAS	3.55	<0.01
HCCS	3.64	<0.01
ELP6	3.66	<0.01
DPH3	3.73	<0.01
DIABLO	3.84	<0.01
TAF15	3.85	<0.01
ZZZ3	3.97	<0.01
BCL2L11	3.97	<0.01
MAPKAP1	4.01	<0.01
C7orf26	4.02	<0.01
EIF1AX	4.08	<0.01
BPTF	4.35	<0.01
CYCS	4.41	<0.01
KDSR	4.45	<0.01
ROMO1	4.49	<0.01
SERF2	4.50	<0.01
KMT2D	4.60	<0.01
FAF2	5.10	<0.01
DOHH	5.37	<0.01
PLAA	5.60	<0.01
CASP9	5.94	<0.01
APAF1	5.97	<0.01
UBQLN1	6.33	<0.01
VDAC2	6.51	<0.01
MARCH5	6.52	<0.01
BAK1	7.72	<0.01

Screen	Correlation	Plot
Staurosporine 0.02μM R08 exp524	0.105	View
Olaparib 4μM R08 exp512	0.105	View
Mitomycin-C 0.06μM R08 exp503	0.095	View
SNS-032 15μM R08 exp443	0.095	View
THZ1 0.06μM R08 exp531	0.094	View
RO-3307 4.7μM R02 exp80	0.091	View
Pimelic-diphenylamide-106 5μM R00 exp28	0.081	View
Tanespimycin 14μM R08 exp527	0.072	View
UM0129480 7μM R02 exp85	0.069	View
PU-H71 1μM R08 exp515	0.069	View
Rotenone 20μM R00 exp34	0.062	View
UM131593 0.2μM R03 exp106	0.062	View
QNZ 0.01μM R08 exp439	0.057	View
Milciclib 2μM R08 exp502	0.054	View
Rotenone 0.07μM R08 exp431	0.054	View
Trimetrexate 0.03μM R08 exp535	0.053	View
Vinblastine 0.2μM R03 exp108	0.051	View
MS023 2μM R03 exp134	0.217	View
Hippuristanol 0.12μM R08 exp489 no dilution day6	0.153	View
Hippuristanol 0.12μM R08 exp488	0.14	View
Benzoate 20000μM R08 exp456	0.139	View
Doxorubicin 0.02μM R08 exp478	0.138	View
AICAR 240μM R03 exp116	0.129	View
Etoposide 0.3μM R05 exp199	0.122	View
Bleomycin 5μM R08 exp459	0.119	View
6-Thio-2-deoxyguanosine 2μM R06 exp259	0.118	View
AICAR 240μM R05 exp211	0.109	View
Aphidicolin 0.4μM R08 exp440	0.103	View
Actinomycin-D 0.001μM R00 exp3	0.103	View
CR131-b 0.005μM R08 exp474	0.101	View
5-Fluorouracil 20μM R00 exp2	0.096	View
Artemisinin 50μM R08 exp450	0.085	View
JQ1 0.8μM R08 exp435	0.082	View
2-Deoxy-D-glucose 800μM R05 exp214	0.082	View
CI-1040 9.5μM R08 exp472	0.079	View
MLN-4924 0.2μM R00 exp21	0.077	View
Atovaquone 15μM R08 exp451	0.073	View
Dorsomorphin 5μM R07 exp357	0.069	View
CB-5083 0.4μM R08 exp468	0.066	View
Etoposide 1μM R00 exp19	0.065	View
Latrunculin-B 10μM R07 exp374	0.065	View
Ethanol 0.01 R05 exp234	0.065	View
GSK626616 14μM R08 exp485	0.064	View
Ammonium tetrathiomolybdate 10μM R08 exp448	0.062	View
Deferoxamine 11μM R07 exp350	0.061	View
GSK461364A 0.1μM R03 exp126	0.06	View
BI-2536 0.02μM R03 exp96	0.057	View
ML-792 0.2μM R08 exp505	0.056	View
LY2090314 0.003μM R08 exp500 no dilution day6	0.053	View
BI-6727 0.04μM R03 exp98	0.051	View

GO Term	Fold Change	Genes
apoptosome	552.63	APAF1,CASP9
activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c	442.11	APAF1,CASP9,CYCS,DIABLO
elongator holoenzyme complex	221.05	ELP6,ELP2
protein histidyl modification to diphthamide	221.05	DPH3,DPH5
porin activity	221.05	BAK1,VDAC2
tRNA wobble uridine modification	103.62	DPH3,ELP6,ELP2
positive regulation of mitochondrial membrane permeability	59.21	BAK1,VDAC2,BCL2L11
positive regulation of membrane permeability	53.48	BAK1,VDAC2,BCL2L11
positive regulation of response to endoplasmic reticulum stress	47.37	BAK1,UBQLN1,BCL2L11
positive regulation of cysteine-type endopeptidase activity	22.46	BAK1,APAF1,CASP9,CYCS,DIABLO
positive regulation of cysteine-type endopeptidase activity involved in apoptotic process	21.05	APAF1,CASP9,CYCS,DIABLO
mitochondrial membrane organization	20.85	BAK1,VDAC2,ROMO1,BCL2L11
intrinsic apoptotic signaling pathway	20.72	BAK1,APAF1,CASP9,CYCS,BCL2L11,DIABLO
positive regulation of endopeptidase activity	19.19	BAK1,APAF1,CASP9,CYCS,DIABLO
positive regulation of peptidase activity	17.49	BAK1,APAF1,CASP9,CYCS,DIABLO
regulation of cysteine-type endopeptidase activity	14.78	BAK1,APAF1,CASP9,CYCS,DIABLO
apoptotic signaling pathway	12.56	BAK1,VDAC2,APAF1,CASP9,CYCS,BCL2L11,DIABLO
positive regulation of proteolysis	9.87	BAK1,UBQLN1,APAF1,CASP9,CYCS,DIABLO
mitochondrial envelope	5.88	BAK1,MARCHF5,VDAC2,ROMO1,CYCS,BCL2L11,DIABLO,HCCS

Table of Contents

MS023 7μM R03 exp135

Mechanism of Action

Technical Notes

Compound References

Compound Supplier

Compound Characterization

Dose Response Curve

Screen Summary

Screen Results