| GO Term | Fold Change | Genes |
| KICSTOR complex | 552.30 | ITFG2,KPTN |
| Seh1-associated complex | 236.70 | NPRL2,NPRL3,DEPDC5 |
| negative regulation of TORC1 signaling | 107.77 | TSC2,TSC1,NPRL2,NPRL3,DEPDC5,ITFG2,SZT2,KPTN |
| cellular response to amino acid starvation | 69.04 | NPRL2,NPRL3,DEPDC5,ITFG2,SZT2,KPTN |
| negative regulation of TOR signaling | 66.95 | TSC2,TSC1,NPRL2,NPRL3,DEPDC5,ITFG2,SZT2,KPTN |
| response to amino acid starvation | 64.98 | NPRL2,NPRL3,DEPDC5,ITFG2,SZT2,KPTN |
| regulation of TORC1 signaling | 51.38 | TSC2,TSC1,NPRL2,NPRL3,DEPDC5,ITFG2,SZT2,KPTN |
| regulation of TOR signaling | 32.73 | TSC2,TSC1,NPRL2,NPRL3,DEPDC5,ITFG2,SZT2,KPTN |
| cellular response to starvation | 29.07 | TSC2,TSC1,FOXO1,NPRL2,NPRL3,DEPDC5,ITFG2,SZT2,KPTN |
| cellular response to nutrient levels | 23.70 | TSC2,TSC1,FOXO1,NPRL2,NPRL3,DEPDC5,ITFG2,SZT2,KPTN,USF2 |
| response to starvation | 23.67 | TSC2,TSC1,FOXO1,NPRL2,NPRL3,DEPDC5,ITFG2,SZT2,KPTN |
| cellular response to extracellular stimulus | 21.08 | TSC2,TSC1,FOXO1,NPRL2,NPRL3,DEPDC5,ITFG2,SZT2,KPTN,USF2 |
| cellular response to external stimulus | 16.89 | TSC2,TSC1,FOXO1,NPRL2,NPRL3,DEPDC5,ITFG2,SZT2,KPTN,USF2 |
| response to nutrient levels | 11.68 | TSC2,TSC1,FOXO1,NPRL2,NPRL3,DEPDC5,ITFG2,SZT2,KPTN,USF2 |
| response to extracellular stimulus | 11.00 | TSC2,TSC1,FOXO1,NPRL2,NPRL3,DEPDC5,ITFG2,SZT2,KPTN,USF2 |
| negative regulation of intracellular signal transduction | 10.79 | TSC2,TSC1,FOXO1,NPRL2,NPRL3,PTEN,DEPDC5,ITFG2,SZT2,KPTN |
| lytic vacuole membrane | 10.42 | TSC2,TSC1,NPRL2,NPRL3,DEPDC5,ITFG2,SZT2,KPTN |
| lysosomal membrane | 10.42 | TSC2,TSC1,NPRL2,NPRL3,DEPDC5,ITFG2,SZT2,KPTN |
| vacuolar membrane | 9.48 | TSC2,TSC1,NPRL2,NPRL3,DEPDC5,ITFG2,SZT2,KPTN |