| GO Term | Fold Change | Genes |
| GATOR1 complex | 552.30 | NPRL3,NPRL2 |
| negative regulation of protein neddylation | 368.20 | RPL11,RPL5 |
| Seh1-associated complex | 236.70 | NPRL3,NPRL2,DEPDC5 |
| negative regulation of TORC1 signaling | 53.88 | NPRL3,NPRL2,DEPDC5,TSC2 |
| cellular response to amino acid starvation | 46.02 | NPRL3,NPRL2,DEPDC5,EIF2AK4 |
| response to amino acid starvation | 43.32 | NPRL3,NPRL2,DEPDC5,EIF2AK4 |
| negative regulation of TOR signaling | 33.47 | NPRL3,NPRL2,DEPDC5,TSC2 |
| regulation of TORC1 signaling | 25.69 | NPRL3,NPRL2,DEPDC5,TSC2 |
| cellular response to starvation | 19.38 | TP53,NPRL3,NPRL2,DEPDC5,EIF2AK4,TSC2 |
| regulation of intrinsic apoptotic signaling pathway | 15.96 | TP53,DDX3X,RPL11,VDAC2,UBQLN1 |
| response to starvation | 15.78 | TP53,NPRL3,NPRL2,DEPDC5,EIF2AK4,TSC2 |
| response to endoplasmic reticulum stress | 14.73 | TP53,DDX3X,BAK1,EIF2AK4,UBQLN1,APAF1 |
| cellular response to nutrient levels | 14.22 | TP53,NPRL3,NPRL2,DEPDC5,EIF2AK4,TSC2 |
| cellular response to extracellular stimulus | 12.65 | TP53,NPRL3,NPRL2,DEPDC5,EIF2AK4,TSC2 |
| cellular response to external stimulus | 11.82 | TP53,BAK1,NPRL3,NPRL2,DEPDC5,EIF2AK4,TSC2 |
| regulation of apoptotic signaling pathway | 10.34 | TP53,DDX3X,BAK1,RPL11,VDAC2,UBQLN1,APAF1 |
| enzyme activator activity | 7.79 | DDX3X,NPRL3,NPRL2,DEPDC5,PPP4R3A,APAF1,TSC2,PLAA |
| regulation of proteolysis | 7.49 | TP53,DDX3X,BAK1,RPL11,UBQLN1,APAF1,CDK2,RPL5 |
| negative regulation of protein metabolic process | 5.88 | TP53,DDX3X,BAK1,RPL11,EIF2AK4,RPL5,TSC2,PLAA,PCIF1 |